Exiguobacterium sp. MH3: U719_00450
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Entry
U719_00450 CDS
T02903
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U719_00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
exm03021
]
U719_00450
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_00450
Enzymes [BR:
exm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U719_00450
Transcription machinery [BR:
exm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U719_00450
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U719_00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-GeneID:
17604425
NCBI-ProteinID:
AHA28441
LinkDB
All DBs
Position
82715..86314
Genome browser
AA seq
1199 aa
AA seq
DB search
MVDVNRFEYMQIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
YCGKYKRIRYKGIICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDPGESTLEKKQLLSEKEYRAYREKFGRSFTAEMGAEAVRKLLR
DVELDKEVAALREELRMIQGQRRTRAIKRLEVLDAFRNSGNNPEWMVLEVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSRGIAPNIKSAKRKIERVQPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERENAIGEGKIFSTVNEALIAYQNGYAHFHTRVAIP
AGVLKNPTFTEEQNEKLLITTVGKLIFNEILPTTFPYLNEPTMTNLQEATPDKYFLEKGT
DVAAELKNRPIIDPFKKGFLGNVIAEVFKRFETTETSRMLDRMKNLGFKHSTRAGITVGI
ADIIVLPDKQEILVEAQDNVDRVMKSYRRGLITEDERYERVVKSWNDAKDEIQSRLMKSL
NRLNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGRIIELPIKSSFREGLTVQEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGIRVTALREGTEEIESLY
DRLVGRTAFENVVHPETGEVLVSTNELIDEDLARAITDAGVDNVEIRTAFTCNTSHGVCK
KCYGRNLATGNDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIDGQVIDFTESRDKRELTVQGLSETRTYTIPFGSRLRVQLGDEVKAG
QVFTEGSIDPKELLNVKGVSGVQNYLLQEVQKVYRMQGVEIGDKHVEVMVRQMIRRVRVI
ESGETSLLPGSLVDISTFKEACKEALRNGKALASAKPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKSDYLRGLKENVIIGKLVPAGTGMSRYRQIDLEVAGEAPVEADSPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttggtagatgttaatagatttgaatatatgcaaatcggcctcgcttcccccgaaaagatc
cgttcatggtctttcggggaagtgaaaaagccggagacgatcaactatcgtacactcaaa
ccggagaaagacggtttgttctgtgaacgtatctttggtccaacaaaagactgggaatgt
tactgtggtaaatacaaacggatccgctataaaggaatcatttgtgaccgctgtggcgtt
gaagtcacgaagtcgaaagtccgtcgtgagcgcatgggtcacatcgagctcgcagcaccg
gtttcgcacatctggtacttcaaaggaattcctagccgtatgggactcgtcctcgacatg
tcaccgcgtgcgttagaagagatcatctacttcgcgtcgtacgtcgtcacagatccaggc
gaatcgacacttgagaagaaacaactcctttcagagaaagaataccgtgcatatcgtgag
aagttcggtcgttcgttcactgctgaaatgggtgcggaagcagttcgtaaattgctccgt
gacgtggaactcgataaagaagtcgctgcattacgtgaagagcttcgtatgattcaagga
caacgtcgtacgcgtgcgatcaaacgccttgaagtcctcgatgcgttccgtaactcaggc
aacaatccagaatggatggtgcttgaagtacttccagtcatcccaccggaacttcgtccg
atggttcaactcgatggcggacgtttcgcaacgtctgacttgaacgacttgtaccgccgc
gtcatcaaccgtaacaaccgtctcaagcgtcttcttgaccttggcgctccgaacatcatc
gttcagaatgaaaaacggatgcttcaagaagcagttgatgctttgatcgataacggtcgt
cgtggtcgtccagtcactggaccaggtaaccgtccacttaaatcactttcacacatgttg
aaagggaaacaaggacgtttccgtcaaaacttgctcggtaaacgtgtcgactactctggt
cgttcggttatcgtcgttggtccaaacctgaagatgtatcaatgtggtcttccaaaagaa
atggcccttgaactcttcaaaccgttcgtcatgaaagaactcgtctctcgtggcatcgca
ccgaacatcaagagtgcgaaacggaaaatcgagcgcgttcaacctgaaatctgggatgtc
ctcgaagaagtcatccgtgagcatccggttctcttgaaccgtgcaccgacacttcaccgt
ctcggtatccaggcgttcgaaccaacgctcgtcgaaggacgcgcgattcgccttcaccca
ctcgtatgtacggcatacaacgccgatttcgatggtgaccaaatggcggttcacgtacca
ctttcggcagaagcacaagcagaagcacgtcttctcatgctcgctgcacaaaacatcttg
aacccgaaagacggtaaacctgttgttacaccatcgcaggatatggtcctcggtaactac
tacctcacgctcgaacgcgaaaacgcgatcggcgaaggtaaaatcttctcgacagtgaac
gaagcgctcatcgcttaccaaaacggttatgcgcacttccatacacgtgttgcgattcca
gccggcgttttgaagaacccgacattcacggaagagcaaaacgagaaattattgattaca
acagtcggtaagttgatcttcaacgagatcctcccaacgacgttcccttacttgaacgaa
ccaacgatgacgaaccttcaagaagcgacgccagacaagtacttccttgaaaaaggaaca
gatgtcgcggcagaactgaagaaccgtccgatcatcgacccgttcaaaaaaggattcctt
ggaaatgtcatcgcggaagtcttcaaacggtttgagacgacagaaacaagccgcatgctc
gaccgcatgaaaaaccttggattcaaacactcgactcgtgccggtatcacggtagggatc
gcggacatcatcgttcttccggacaaacaagagattcttgttgaagcgcaggacaatgtc
gaccgcgtcatgaaatcgtaccgtcgtggtctcatcacagaagacgagcgctatgagcgc
gtcgttaaatcgtggaatgatgcgaaggatgaaattcagtctcgtctgatgaaatccctc
aaccgtctcaacccgatcttcatgatgagtgactccggtgcccgtggtaacgcgtcgaac
ttcacgcagctcgctggtatgcgtggactcatggccgctccaagtggacggatcatcgag
ctcccgatcaaatcatcgttccgtgagggtctaacggtacaggaatacttcatctcgaca
cacggtgcacgtaaaggtcttgccgatacagccttgaaaacggctgactcaggttacctg
actcgtcgtctcgttgacgttgctcaagacgtcatcatccgtgaagatgattgtggaacg
gatcgtggtatccgcgtcacagcactccgtgaaggaacggaagagattgaaagcctctac
gaccgcctcgtcggccgtactgcattcgaaaacgtcgttcaccctgaaacaggagaagtc
ctcgtttcaacgaacgaactcatcgatgaagacctcgcgcgtgccatcacggacgctggt
gtcgacaacgttgagatccgtactgccttcacatgtaacacaagccatggtgtctgtaag
aaatgttacggacgcaacttggcaacaggcaacgacgtcgaagtcggcgaagctgtcggt
atcatcgcggcacaatcaatcggtgagccaggaacgcagcttacgatgcgtaccttccac
acaggtggggttgccggggacgatatcacacaaggtcttccgcgtatccaagagttgttc
gaagcgcgtaacccgaaaggtcaagcggtcatctcggaaatcgatggtcaagtcatcgac
ttcacggaatcgcgtgacaaacgtgaattgacggtccaaggactcagcgaaacacgcaca
tacacgatcccattcggttcgcgtctacgtgttcagctcggggacgaggtcaaagccggt
caagtcttcacggaaggttcgatcgatccgaaagaactcttgaacgttaaaggtgtatcc
ggcgttcagaactacttgctccaagaagttcaaaaagtataccggatgcaaggggttgag
atcggtgacaaacacgtcgaggtcatggttcgccaaatgatccgtcgcgtacgtgtcatc
gagtctggtgagacttcactcttaccaggttcgctcgtcgatatcagcacgttcaaggaa
gcttgtaaagaagcgctccgtaacgggaaagctctcgcttcggcgaaaccagttcttctc
ggtatcacgaaagcgtcacttgaaacagattcattcctatcggctgcgtcgttccaagaa
acgactcgtgtccttacggatgcagcgattaaagggaagagcgactaccttcgcggcttg
aaagagaacgtcatcatcggtaagttggttccagctggtactgggatgtcacgttaccgt
cagatcgatctcgaagtagctggcgaagcacctgtagaagccgattctccggtagaataa
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integrated database retrieval system
