Exiguobacterium sp. MH3: U719_02435
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Entry
U719_02435 CDS
T02903
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03420
Nucleotide excision repair
exm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U719_02435
03430 Mismatch repair
U719_02435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_02435
Enzymes [BR:
exm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U719_02435
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U719_02435
MMR (mismatch excision repair)
Other MMR factors
U719_02435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-GeneID:
17604820
NCBI-ProteinID:
AHA28781
LinkDB
All DBs
Position
466677..468902
Genome browser
AA seq
741 aa
AA seq
DB search
MFNLSEQLVSGLNPEQARAVKHTEGPLLIMAGAGSGKTRVLTHRVAYLMAAKQVAPWNIL
AITFTNKAALEMRDRIGRLVGGVANDIWVSTFHSMCVRMLRRDIDQLGYDRNFTILDSSD
QQSAIKLVLKEQNLDPKKWDPRSMLTIISSQKNELRSAEFYASIVTSPYEKTVAEIYKGY
EAVLRRNNALDFDDLIGKTTELFKKSPDVLAYYQKKFRYIHVDEYQDTNKAQYDLVNLLA
SGHQNLCVVGDSDQSIYRWRGADIANILSFEEDYPNAAVILLEQNYRSSKRILEAANHVI
QNNSTRKDKKLWTDNDEGEKLVVHTAENEREEAFYIVQEIRNSLRYGMKLSDIAILYRTN
AQSRAIEETLLKSNVPYKMIGGTKFYDRKEIKDVFAYLRLISNPDEDLSFARIVNEPKRG
IGATTIDKLRDFADLQGVSLMEAIRDIELSSIAPKTAAKLTDFRTMILGLSQMQEFISLS
ELVEEVLEKSGYRQVLKEDKTLEAQSRLENINEFITVAQNFEKETAKADPEDRTIIAFLT
DLTLVADVDSLDETDPEEQVTLMTLHSAKGLEFPVVFLIGMEEGLFPHSRSLQDEDEMEE
ERRLAYVGITRAEKRLYLSHARMRSLYGRTNANQESRFLAELPEVVIERTGKKAKPLPWE
DRPVPQGKAVIGRSISKPTAMKTSGAETLGWSVGDKAEHGKWGLGTVVQTRGEGDNLEID
IAFPAVGIKRLLAKFAPIKKV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttgagtgaacagctcgtcagtggactaaaccctgagcaagcaagagcagtc
aagcatacggaaggtccactgctgatcatggcaggagccggttccgggaagacacgcgtc
ctgacacatcgggtcgcttatttgatggcggctaaacaagtcgcaccgtggaacatcctc
gcgattacgttcacgaacaaggcggcgctagaaatgcgagaccggatcggtcgtttggtc
ggtggtgtcgcgaacgatatttgggtctcgaccttccactcgatgtgcgtccggatgtta
cgtcgcgacatcgatcagcttggatacgatcgtaacttcacgattcttgattcaagtgat
cagcagtcggcgatcaagctcgtcttaaaggaacaaaacttggacccgaaaaaatgggat
ccacgttcgatgctgacgatcatctcgtcacagaaaaatgaattacgcagtgctgaattc
tacgcctcgatcgtgacgagcccgtatgaaaagacagttgctgaaatctataaaggatat
gaagcggtcttacgccggaacaacgcgctcgactttgatgatttgatcggaaaaacgacg
gaattgttcaagaagagtccggatgtccttgcttactatcagaagaaattccgctacatt
catgtcgatgagtatcaagatacgaacaaagcccagtatgatctcgtcaacctgttagca
tcgggacatcagaatctctgtgtcgttggagactcggatcagtcgatctatcgctggcgt
ggtgctgacatcgcgaacatcctctcgttcgaagaggactatccgaatgcagctgtcatc
ttactcgagcaaaactaccgttcttccaaacgaatcttggaagcagccaaccatgtcatc
caaaacaactcgacacgtaaagataagaaactttggacggataatgatgaaggcgagaag
ctcgtcgttcatacggcagagaatgagcgggaagaagccttttatatcgtccaggagatt
cggaactcgcttcgttacgggatgaaactgagcgatatcgcgattctgtaccggacgaat
gcgcaatcgcgtgcgatcgaggaaacgcttcttaagtcgaacgttccgtacaaaatgatc
ggcggcacgaagttctacgatcgtaaagagatcaaggacgtgtttgcttatctccgattg
atttcgaatccagatgaagacctgtcattcgcgcggatcgtcaacgaaccaaaacgcggg
attggtgcgacgacgattgataagctgcgtgatttcgccgacttacaaggtgtgtcattg
atggaagcgattcgcgatatcgaattgtcgagtatcgcaccaaagacggcagcgaagctg
acggatttccggacgatgattctcggactcagccaaatgcaagaattcatcagcctttcg
gaactagtcgaagaagtactcgagaaatcaggctatcgtcaagtgctgaaggaagataag
acgcttgaagcacaaagtcgtctcgagaacatcaacgagttcatcaccgttgcacaaaac
ttcgagaaggagacggcgaaagccgatccagaagaccggacgatcatcgccttcttgact
gatttgacactcgtcgccgatgtcgattcactcgacgagacggatccagaagaacaagtc
acgttgatgacgctccactcggcaaaaggactcgagttcccggtcgtcttcttgattggg
atggaggaagggttgttcccacatagccgctcgcttcaagatgaagacgagatggaagaa
gaacgtcgcctcgcgtacgtcgggatcacacgtgctgagaaacgcctttacttgtcacac
gcgcggatgcgctccctgtacggacgaacgaatgcgaaccaagaatcacggttcctagca
gagctgccggaagtcgtcatcgagcggactggtaaaaaagcgaagccactcccatgggaa
gaccgtcctgtcccgcaaggcaaggccgtcatcggtcgctcgatcagtaaaccgacagca
atgaagacgtcaggtgcggaaacgctcggttggtcggtcggagataaggcagagcacggg
aaatggggactcggtacagtcgtccagactcgtggtgaaggggataatcttgaaatcgat
atcgcattcccagcagtcggaatcaaacgattgctcgcgaaattcgcaccgattaaaaag
gtatga
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