Exiguobacterium sp. MH3: U719_03865
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Entry
U719_03865 CDS
T02903
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
exm
Exiguobacterium sp. MH3
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_03865
Enzymes [BR:
exm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U719_03865
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U719_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
ECSIT_N
D5_N
Motif
Other DBs
NCBI-GeneID:
17605105
NCBI-ProteinID:
AHA29037
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Position
742511..745942
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AA seq
1143 aa
AA seq
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MNHMHIGRAGSGKTTQLIERVVQELEQRPLGEKMYFIVPDQMSFEMERRIATDERIAGLV
RLEVMSLRRFAFHILRDYGNQAIPFLDETGTQLLLRQVVEESEDELKIFKRTKNMPGFFQ
GLDELITSFKRSLIEPDMLRQVSDRSLERSPKLNDLALIYERFTERIVDKALHADDYYTT
LLELLPKARLDQATIIVDGFYEFSLQEQQVLLALMQQVAEMHISFTMDATDPYAKQTSFG
VSQRCYMQLIGQMQELSIPYEEILYDQPIKFQSEGLRHLEQALLKPGYPPVDHDIDGFQM
TAAVNRQVEAESAVRKAIQLVRQKGYRFREMAFVVRHLEPYADHLERAFHMYDVPYFLDQ
RESMVHHPLVDLIQSALDIVTSGYREETVFRLLKTELLPIPAEDARLALDRFETFVLERG
IKGSMWQQPWQLKRRLAEEVRLTEEELAQEEELNHLRTFVVDLIEPLHRRLKQAKTMSAY
TKGLYQFLEEQKIAERLMEWRKQALEQDQLLVAREHDQVYEAILHLFEQLEAAAPEHTLS
TELFVQMVETGLESLRFALVPPSLDQVIATDYVRGRLQRVKVVFLLGANDGLIPFVQDQS
KLLSENDHDFLHEHGIPVGKASLDVFDDELFYLYQGMMAPSEALYVSYALVDEEGKALQP
AAITKQLKRQLLLDRPIKTHFAEAGEHAPQEQLDFVTSPDRAAAATAIELRRLQRRYPIQ
PIWFEVYNTLLENGQGRERMGLFSSALFYQNQAEALPEGLAHRLYGDSLQASVSRFETYN
ACSYKHFARYGLRLRERKLYKFEAPDIGNLFHGALNDLSLSIKASGRHWREIDGETCGTL
AKEAVEKVTPEIQNAILMSSSRFGYIKKKLTDVVEQTAKMLVEQAKRTDFEPDLFEISFG
NATFPPLRFTLPDETEIEFTGRIDRIDQATIGDQLYVRIIDYKSSARGLDFAEIYYGLAI
QMLLYLKTVVEQSELLYQQQAKPAGALYFHVKNPMLRGDLSADEEERNQLLLESYQMQGV
ILENDEVLRAMDHIAYDERKKSPLVKVTFTKNGLHKTQTKGVVQEEDLSALMDHAWEALK
DSSQDIYDGDIAINPFDYQERTPCSFCEYRSVCQFDESLGNQYRPLKPMSEKEVLERLKE
EEE
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatatgcatattggtcgtgccggtagtgggaaaacgacacaattgatcgagcgc
gtcgtacaagaactcgagcaacgaccattaggggagaagatgtatttcatcgttccagat
cagatgtcatttgaaatggagcggcggattgcgacagatgaacggatagcaggtcttgtt
cgtcttgaggtcatgagtctacggcgctttgcgtttcatattttacgcgattacgggaat
caagcgattccatttcttgatgagacggggacacagctattactgcgacaggtcgttgag
gaatcagaagacgaactgaagatttttaaacgaactaaaaacatgccaggatttttccaa
ggacttgatgagctcattacgtcgtttaaacgttcgttgattgagccagacatgttgcgt
caagtgagtgatcgctctctcgaacggtcaccgaaattaaacgaccttgcgttgatttat
gagcgctttacggaacgaattgtcgataaagcactccatgcagacgattactatacgacg
ttactcgaattacttcccaaagcgcgactggatcaagcgacgatcatcgtcgacggattt
tatgaattttcgctccaggaacaacaagttttactcgccttgatgcaacaagtggctgaa
atgcatattagttttacaatggacgcaacggatccttatgcgaaacaaacttcttttggt
gtgtcccagcgatgctacatgcagttgatcggtcaaatgcaggagctgtcgattccatac
gaagaaatcttgtatgatcaaccaatcaagtttcaatcagaagggctacgacatttggag
caggccttgttgaagccgggatatcctcctgtcgatcatgacattgacggctttcagatg
acagctgcagttaaccgtcaagttgaagcggaatcagccgtgcggaaagcgattcaactc
gttcgacaaaaagggtatcgctttcgtgagatggcattcgtcgtgcgacatcttgagccg
tatgcggatcacttggaacgagcattccacatgtatgatgttccatatttcttggatcaa
cgtgagtcgatggttcatcatccgcttgttgacttgattcaatccgctttagacatcgtg
acatcgggttatcgggaagaaacagtctttcgtttactgaagacggagctcttgccgatt
cccgcagaagatgcgcgtctagcgctcgatcgtttcgagacgttcgtgctcgaacgcggc
atcaaaggatcgatgtggcaacaaccgtggcaattaaagcgacgcttagcagaggaagtt
cgcttaacggaagaggagcttgcgcaagaagaagaactgaaccatttacgaacattcgtc
gtcgacttgattgaaccgttgcaccgtaggttaaagcaggcgaagacgatgagcgcgtat
acgaaaggtctttatcaattcctcgaagaacagaaaattgcagaacgtttaatggaatgg
cgtaagcaggcactagagcaggatcaattacttgttgcgcgcgagcatgatcaagtatac
gaagcgatacttcatctattcgagcagctagaagctgctgcacctgagcacactttatcg
acggagctgttcgttcagatggtcgagacaggacttgagagccttcgttttgcacttgtt
ccgccatcgctcgatcaagtgatcgcgacggactatgtccgtggacgattacaacgagta
aaagtcgtctttttactgggagcgaatgatggtctgattccgttcgttcaagatcaatca
aagttactgtccgaaaatgatcatgactttttacatgaacatggtattccggttgggaaa
gcgtctcttgatgtgtttgatgatgagctgttttacctgtatcaagggatgatggctcca
agtgaagccttgtatgtcagttacgcacttgtcgatgaagaaggaaaggcgcttcagccg
gcagcgatcacaaaacaattaaagcgacaactgttgctcgatcgtccgatcaaaacacac
tttgcagaagctggggaacacgcaccgcaagaacaacttgatttcgtaacgagtccagat
cgcgcggcagcagcgacggcgatcgagctgcgccgtttgcaacgacgttatccgattcag
ccgatttggttcgaagtgtacaatacgcttctcgaaaacggacaggggcgtgaacggatg
gggttattctcgagtgccttgttctatcaaaatcaagcggaagccttgccggaagggttg
gcgcatcgtctatatggtgattcactgcaagcgagcgtttcgcgttttgagacctataac
gcctgctcgtataagcattttgcccgatacggtcttcgtttacgcgagcggaagctgtat
aaatttgaagcaccagacatcgggaatctgttccacggtgcattgaatgatctgtcgctc
agtattaaagcttctggacgacactggcgagaaatcgacggcgagacgtgcggaacactt
gcgaaggaagctgtcgaaaaggtgacgccggaaattcagaatgcgatcttgatgagttcg
agtcgattcgggtatatcaagaaaaaattgacggatgtcgtggagcaaacagctaaaatg
cttgtggaacaagcaaaacgaacagattttgaacctgacttatttgaaatcagttttggg
aatgcgacgttcccaccattacgctttacgttaccggatgaaacagaaattgaattcacg
ggtcgcatcgaccggattgatcaggcgacgatcggtgatcagctatacgttcgaatcatt
gattacaaatcgagtgctcgaggactggattttgcggaaatctattatgggcttgcgatt
cagatgttgttgtatttgaagacggtcgtggaacagtcggagttgctctatcaacagcag
gcgaaaccagctggtgcgttatatttccacgtcaaaaacccgatgctacgaggcgattta
tcggctgacgaagaagagcgcaaccaactgttactcgagtcctatcaaatgcaaggcgtc
attctcgagaatgacgaggtactacgagcgatggatcatattgcgtacgatgaacgaaaa
aaatcaccgctcgtcaaagtgacattcacaaaaaacggactgcataagacgcagacgaaa
ggtgtcgtacaagaggaagatttatcagcgctgatggatcatgcatgggaggcattaaaa
gacagcagtcaagacatctatgatggggatatcgccatcaatccgtttgattatcaagag
cggacaccgtgtagtttttgtgagtatcgttcagtctgtcagttcgatgaatcgcttggg
aatcagtatcgcccattaaaaccgatgtctgaaaaagaggtactggaacggttgaaggag
gaagaagaatga
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