Exiguobacterium sp. MH3: U719_03870
Help
Entry
U719_03870 CDS
T02903
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
exm
Exiguobacterium sp. MH3
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_03870
Enzymes [BR:
exm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U719_03870
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U719_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
SF1-HH
AAA_11
AAA_16
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
17605106
NCBI-ProteinID:
AHA29038
LinkDB
All DBs
Position
745939..749490
Genome browser
AA seq
1183 aa
AA seq
DB search
MSVRWTEEQQQAISARGGHILVSAAAGSGKTAVLVERLTQRLIDPEDELSADRILVATFT
NAAAREMKTRVIEVMDQRIKEAPDDLYLKKQRQLMNRAQITTIHSFCLSILRENYYRIGL
DPAFRIADESELLLLQDDVLEAVFESFYASEDPGFYDLIDSYTSDRDDQAMLTLISNLYR
FSRSLPDPEAFYAHLVSQYDQPIDPDDSPLMQRLVELEWESLSNLLGRYRELAFELEQSG
YAEMGNMMRQDISPFTLLETSERHWSMVALAFQAVEFGRWKSPRGDEGIKPFQAERTRLV
AEFKKMKELFVQKTGVDYLEDLRSQLRHVETIVTLVRQFASDYLEAKQQRGIVDFSDLEH
FALEILTDEGQPSDVAKLLKERFVEVLVDEYQDTNEVQERIIQLVSKTDEATGNLFMVGD
VKQSIYKFRHAEPGLFLEKFKRFQQTDVGTRIDLTKNFRSRLEVLDGTNQIFRQVMDETV
GEIDYDEAAHLRLGNLSYLESEQVAPELLLIDPLDSEKEEVEARAIATRILELVDSKHPH
LIYDAKANRFRTCEYRDIVVLARSRGKRVQALVEVLEQYEIPVYADTTGGYFQATEIQIM
MALLKTIDNPLQDIPFASLLRSPIFGVADRDLGRIRAKQKEGSFYEAALAMAAEESSLGI
RMDEIIRQIQSWRTEERGSALPAFIRSLFDQTGYFEYVGCLAGGKSRQANLNALYERAKQ
YETSGYRGLYRFLRLINRLIERGEDFAEARSLGEDEDVVRIMTIHQSKGLEFPVTIVSQL
TKQFNKQDQMQAIQLHKTYGIALDAIDPIRRLRSGTLLKEVIRREMDREMKAEEMRVLYV
AMTRAKEKLILVGTVKDLEDQMATWQMTPPDEVLLPENDRRQAKSYAEWVVPAVLRSSLL
RPDETDWSIRVMSLEELAPYQEISTLVEQLEHVQKLEKIDVPVNSQVKEIVEAAFSYQYP
HALATETAAKQTVTELKRAEQLERAAFETTYRQTTYYRAPQFLGPVLSGAERGTVLHLAM
QLYEPDEPISQQINQWEATERITPIEATTMREATAQLQGFLDSEIGQLFSERLRTNHVYR
ELPFTYKIGASRFRKDWIGPVDDAVMQGIVDCLIQDGESYILLDYKSDQIVTTEVGQTPA
DVLRDRYATQLNLYQEALEAILHIRISRKVIYAFALEETIDLI
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgttggacggaagaacaacaacaagccatttcagctagaggtggacatatc
ctcgtctcagcggcagcgggatcagggaagacagcggtcctcgttgaacggctgacgcaa
cgattgattgatcccgaagatgagctgtcggctgatcggattctcgtcgctacctttacg
aatgcggcagcacgtgagatgaagacgcgagtcatcgaggtcatggaccagcgcatcaaa
gaggcacctgatgatttgtatttgaaaaaacagcgtcaattgatgaaccgggcacaaatt
acaacgattcattcgttctgtttgtcgattctgcgcgagaattattaccggattggttta
gatcctgcgtttcgaattgccgatgaatccgaattactgttgttacaagacgatgtctta
gaagcagtctttgagtccttttatgcctccgaggacccaggattctatgatttgattgat
agttatacgtcagatcgggatgatcaagccatgttgacgctgatttcgaatctctatcga
ttttcccgttccttaccggatccggaagccttttatgcacatttagtcagtcagtacgat
cagccgattgacccggatgattctccacttatgcaacgactagtcgaattagagtgggaa
agtctctcgaatttattgggacgttaccgagaacttgcttttgagctggagcagtctggt
tatgcggaaatgggaaacatgatgcgacaggatatctctccctttaccttgctcgaaacg
tcagaacgacactggtcgatggttgcgcttgcttttcaagcagtagagttcggtcgctgg
aagagtccacgcggggatgaaggaatcaaaccgtttcaagcagagcggacgcgactcgta
gcggagttcaagaaaatgaaagagctgttcgtccaaaagactggtgttgattacttggag
gacttgcggtcgcagcttcgacacgtggagacgatcgtgacactcgtacgtcaatttgca
agcgattatctcgaagcgaaacaacaacgtggtatcgtcgatttttcggatcttgaacat
tttgcattagagattttgacggacgaaggacaaccgtcagacgtggcaaaacttctgaag
gaacgcttcgttgaagtactggtcgacgaatatcaagatacgaacgaggttcaggaacgc
atcatccaattggtctcgaaaacggatgaggcgacaggaaatctattcatggtcggtgat
gtcaaacaatccatctataaatttcgtcatgcagagccaggattgttccttgagaaattc
aaacgattccaacagaccgacgttggaacacggatcgatttaacaaaaaacttccgcagt
cgtcttgaggtgctggatggaacgaatcaaatcttccgccaagtgatggatgagacggtc
ggggagattgattacgatgaagccgcgcaccttcgacttgggaatctgagttatctcgaa
tcggagcaagtggcacctgaattacttttgattgatccacttgatagtgaaaaggaagag
gttgaagcacgagcgattgcaacgcgaattttagaactcgttgattcgaagcatccacat
ctaatctatgatgcgaaagccaaccgattccggacctgtgaataccgcgacatcgtcgtc
ttagcacggtcgcgtggtaagcgtgtccaagcgcttgtcgaagtgctcgaacagtatgag
attccggtctatgcggatacgacaggtggatacttccaagcgacggaaattcaaatcatg
atggcattgctcaagacgatcgataatccgcttcaagacatcccattcgcgagtttgtta
cgatcgccgatttttggggtggcggatcgagatttaggacggattcgagcaaaacaaaaa
gaaggaagcttttatgaggcagcgctagcaatggcggcagaggaatcatcactcggaatt
cgaatggatgaaatcatccgtcagattcaatcatggcgaactgaagagcgtgggagtgcc
ctacctgccttcattcgatcgctctttgatcagaccggctattttgagtacgtcggctgt
ctcgccggaggaaaaagtcgtcaagccaacttgaacgccttatatgagcgagcgaagcaa
tatgagacgtccggttatcgtggtctctatcgtttccttcgtctgatcaatcgattaatt
gaacgaggagaagacttcgcagaagcccgttcgcttggagaagacgaggacgtcgttcgc
atcatgacaatccaccaatcaaaaggactcgagttccccgtgacgatcgtcagccaattg
acgaagcaattcaacaaacaggatcaaatgcaggcgattcagttgcataagacgtatggt
attgccctggatgcgattgatccgattcgtcgtttgcgatctgggacactcttaaaagaa
gtcatccgccgggaaatggatcgagagatgaaggcagaagagatgcgcgtcttgtatgtt
gcgatgactcgagcgaaggaaaagttgattctcgtcgggacagtcaaggatttagaggat
caaatggcgacctggcagatgacgccaccagatgaagtcttacttcctgaaaatgaccgg
cgccaagcgaagagttatgcggaatgggtcgttccggcagtcttacgcagcagtttacta
cgtccggatgagacggattggtcgattcgcgtgatgtctttagaggagttagcaccgtat
caagaaatctcaacactcgtggagcaactcgaacatgttcagaagcttgaaaaaatcgat
gtgccggttaattcgcaagtcaaagaaatcgtcgaagcggcattttcgtatcagtatccg
catgcgcttgcgacagagacggcagcaaaacagaccgtcacggaactgaagcgggcggag
caactggaacgtgcagcattcgaaacgacatatcgccagacgacgtattaccgtgcgcca
caattcctcggacctgttttaagtggagcggaacgagggacggtcttacacttagcgatg
caattgtatgaaccggacgaaccgatttcgcaacaaatcaatcagtgggaagcaacggaa
cgcattacgccgattgaagcaacgacgatgcgggaagcaacagcacagttacaagggttc
ctcgactctgaaatcggacaattgtttagcgaacgattacggacgaaccacgtctatcgg
gaattgccgttcacatataagatcggggcatcgcgtttccggaaagactggataggtcca
gtggatgacgcagtcatgcaaggaatcgtcgactgtttgattcaggatggggagtcatat
atcttgctcgattataaatcggatcaaatcgtcacgacagaagtcggacagacacctgct
gatgtgttacgggatcgatacgcaactcagttgaatctgtatcaagaagcgttagaagcg
attcttcatattcgaatttcacgcaaggtcatctatgcgtttgctttagaagaaacgatt
gatttaatttaa
DBGET
integrated database retrieval system
