Exiguobacterium sp. MH3: U719_04340
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Entry
U719_04340 CDS
T02903
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U719_04340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_04340
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U719_04340
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U719_04340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF8075
Motif
Other DBs
NCBI-GeneID:
17605200
NCBI-ProteinID:
AHA29130
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Position
847073..847822
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AA seq
249 aa
AA seq
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MIDKAEGLVLRTVVYGESNKIVTLLTREYGKLAVMARGAKKPGSRFNAASQPFVRAVYIY
PRSRGLGQLKSADVITSHAHIRQDVVLMAYAMYLLELADKALDERVPQPALYDLFVEGLE
AMDEGLDPDVVSFIIELRLLRHLGIAPHLNGCTICGSAEAPFAFSLHHGGLLCRRHRHED
EHAVFMSEAVAKMLYVFSVYDFSRIGTVTVKPETKRLLRQIMDAYMERYSGLRLRSKRVL
DQLIDFGND
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataaggcggaagggcttgtactacgaacggtcgtatacggtgaatcgaataag
atcgtcacgctactgacacgtgaatacggcaagctcgccgtcatggcgcgaggagcgaag
aagccgggcagccgctttaacgcggcaagccagcctttcgttcgagccgtctatatctat
ccacggtctcgtggtctcggtcagttaaaatcggcagacgtcatcacgagtcatgcgcat
atccggcaagatgtcgtcttgatggcatatgcgatgtatctactggagcttgcagataaa
gcgcttgatgaacgtgtgccgcaaccagcgctgtatgatttgttcgtcgaaggactggag
gcgatggatgaaggactcgatcccgacgtcgtctccttcatcattgagttgcgcctgttg
cgtcatctagggattgcgccacacttgaacggctgtacgatttgcgggagtgctgaagca
ccgtttgctttttcgttacaccacggcggtctactctgtcgccggcaccgtcatgaggat
gaacatgccgtctttatgtcagaggcagtcgcgaagatgctctacgtgttttccgtctat
gatttttcgcgaatcgggaccgtgacggtgaagccggaaacgaagcgtctactacgtcaa
atcatggatgcttatatggaacgttacagcgggttacgcctacgttcaaaacgtgtcctc
gaccagttgattgatttcggcaacgattga
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