Exiguobacterium sp. MH3: U719_11605
Help
Entry
U719_11605 CDS
T02903
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U719_11605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_11605
Enzymes [BR:
exm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U719_11605
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U719_11605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
HHH_5
UvrD_C
AAA_22
UvrD-helicase
AAA_16
AAA_28
AAA
SBP_bac_3
NTPase_1
TsaE
AAA_5
nSTAND3
AAA_25
TrwB_AAD_bind
NPHP3_N
SLFN-g3_helicase
T2SSE
Helicase_RecD
KTI12
AAA_23
DEAD
AAA_29
Motif
Other DBs
NCBI-GeneID:
17606648
NCBI-ProteinID:
AHA30298
LinkDB
All DBs
Position
complement(2132650..2134875)
Genome browser
AA seq
741 aa
AA seq
DB search
MEHPHQVVGRVKRVLFSSEEEAHSIVLVAVKEKNFELKETELVITGTGVGIELGGTYQAF
GRLVDHPRFGKQLKAELIRRSVPMTKHATIRFLTNGSFTGIGPKTAKNIVDALGEEAVDL
ILKDERVLNQVPGLKQKQADIILSRLATLYGVDQLMLFLAPFDVTPKLAAKIYAAYEGDA
MARIRENPYSLMYEVNGIGFKTADHIASHLGLVGLHPERVAASIMHILEQEAGEGHAFAT
VDSLLQRAPRLLGEDPGERLEQAIELLLAEDKVKLEEGCLYLPTIFYAEVRAAKELARVM
ANGAEQEVDVATILEAIGHLEEQFGMEYAAQQREAIELAVKAPLMVLTGGPGTGKTTVIK
GILHALQEIHDWPLEKSRVKTGDVYPYVLVAPTGRAAKRLSEATDVPAMTIHRLLKYDGT
NFQLNEDQPITGKVLIIDESSMIDIYLLSSLLRAVPNGMKILFVGDRDQLPSVGPGQVLA
DLMDTEGIPVVRLNVVHRQAEDSSILRLAHDLKNRTTSADLLSPLADRRFYTASPQETLR
GISAFAEKALAKGYSKFDVQVLAPTYRGQVGIDELNVALQRVYNPEEPKKREVKQGTRIY
RTGDKILQLVNNAEENVYNGDIGEIVNIFFAKENVDKVDKIIARFDQTEVEYNRSDWDQF
THAYAITIHKAQGSEFPIVLMPVYFTGAFKHSRNLIYTAVTRAKSSLLLFGDPRAFHKAS
QEEEPRRRTRLIERLGGVTKT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggagcacccccatcaagtcgtcgggcgcgtcaaacgtgtgctcttttcttctgaagaa
gaagcacactccattgtattggtcgccgtcaaagaaaagaactttgaactgaaagaaacc
gagctcgtcatcacgggtactggggttgggatcgaactcggaggaacgtatcaagcattc
ggtcgtctcgtcgatcatccccgattcggaaaacaactgaaggcggaactgattcggcga
tcggttccgatgacaaaacatgcgacgatccgcttcttgacgaatggttcgttcaccggc
attggtccgaagacagcgaaaaatatcgtcgatgctctcggagaagaggcagtggatctc
attttgaaagatgaacgggtactgaatcaggtgcctgggttaaaacaaaaacaagctgac
atcatcttgagtcgactcgccacgttatacggtgtcgatcagttgatgctgttcttagca
ccatttgatgttacgccgaagctagcggcaaagatttatgctgcttacgaaggggacgcc
atggcgcgaatacgagagaatccatattccttgatgtatgaagtgaatgggattggtttt
aagacagccgatcatatcgcatcacatctcggactcgtcggattacacccggagcgcgtc
gctgcttcgatcatgcacatattagaacaagaagcaggagagggacatgcctttgcgaca
gtcgactcactattgcagcgagcaccccgtttgcttggtgaagacccgggtgaacggcta
gaacaagcgattgaactgttgctcgctgaagataaggtcaagctcgaagaaggctgtttg
tatttaccgacgatcttttatgccgaagtccgagcggcgaaggaactggcgcgcgtcatg
gcgaacggtgccgaacaggaagtcgatgtcgcgacgatccttgaagcaatcgggcatctc
gaagaacagtttggcatggaatatgcggcgcaacagcgagaagcgatcgagttagcggtc
aaagcaccgctgatggtcctgaccggtggacccggtaccggtaagacgactgttatcaag
ggaattttacatgccctgcaagaaattcatgattggccgcttgagaagagtcgcgtcaag
acgggagatgtttatccgtacgtccttgttgcaccgaccggacgcgccgctaaacgtttg
tcggaagcaacggacgtcccagcgatgacgattcatcgtctgttgaagtatgacggaacg
aatttccaattaaatgaagatcagccgatcaccgggaaagtactgatcatcgatgagtcg
tcgatgattgatatctacttgttatcgagtctgctccgtgctgtgccgaacggtatgaaa
atcttgttcgtcggtgaccgcgatcagttaccatccgtcggtccagggcaggtgctggca
gatttgatggatacggaagggattcccgtcgttcgtttgaacgtcgtccatcgccaagcg
gaagattcttcgattttacggctcgcgcatgatttgaagaaccggacgacgtcagctgat
ttgttatcaccacttgcggatcgtcgcttttacaccgcgtctccgcaagagacgttacgc
ggcatctcagccttcgcggaaaaagcactcgcaaaagggtattcgaaattcgatgttcag
gttctggcaccgacttaccgtgggcaggtcggaatcgacgaactgaatgtcgccttgcaa
cgcgtctacaatccggaggaaccgaaaaaacgcgaagtcaaacaaggcactcggatttac
cggaccggggataagattcttcagctcgtcaataatgcggaagagaacgtctataacgga
gatatcggcgaaatcgtcaatatcttcttcgccaaagagaacgtcgacaaggtggataag
atcatcgcccgcttcgaccagacggaagtcgagtacaaccggagtgactgggatcaattc
acgcatgcctacgcgattacgatccacaaggcacaagggtccgagtttccgatcgtcttg
atgccggtctatttcacgggggcattcaagcattcccgaaacttgatttatacggcggtc
acccgtgcgaagtcgagtttattattgttcggcgacccacgagcgtttcataaagcgtcg
caagaagaggagccgcggcgccgaacacgattgattgaacgactcggtggggtgacaaag
acttga
DBGET
integrated database retrieval system
