Exiguobacterium sp. MH3: U719_11685
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Entry
U719_11685 CDS
T02903
Name
(GenBank) single-stranded DNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03410
Base excision repair
exm03430
Mismatch repair
exm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U719_11685
03430 Mismatch repair
U719_11685
03440 Homologous recombination
U719_11685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_11685
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
U719_11685
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U719_11685
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U719_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
MctB
SafA
Motif
Other DBs
NCBI-GeneID:
17606664
NCBI-ProteinID:
AHA30314
LinkDB
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Position
complement(2150259..2152568)
Genome browser
AA seq
769 aa
AA seq
DB search
MYHAKKTWLDKVIDSEQIEQLTADGTISPHVAQLLVQRGFTTREAARDFLETDQMAFHDP
FAFKDMPKVVERIQRAVDEGEMILIYGDYDVDGVSSAAILWHALIEIGGMAECYIPNRFT
EGYGPNEAAFRWAAEEGFSLVITVDCGISGIHEADVLKELGVDLIITDHHEAKETLPDAF
ALIHPGVDPDYPFSKLAGAGVAFKVAHALLDREPVELLDLAVLGTIADLVPLVGENRLLA
IRGIEALNASERPGILALRDVCSLTEDELTEESVGFAFGPRINAAGRLDSAMPALEMLLA
ESKDEALHLAKQLDQQNKQRQDIVKQIAEEATALVEERFKDDRVLVVDAADWNPGVVGIV
ASRLVEKYHRPVIMLCHDAEKGTAKGSGRSIPAFDLFAELTKCEDILPHFGGHPAAAGMT
LSSDDVEALRQRLNEQASTLPDDAFIATIDVDLRLQVSDVSIQLIEDIQRLAPFGMGNPA
PRIVIEQAKIRDMKRIGRDLTHVKALLSGDGKELDAIGFGFGDLVDEVSTLSEIHLMGSL
NINEWNGFRKPQLMIQDVAVEDVQVFDYRGGKRPLSELFALPHETTTFVAFTDEVKEKYT
ERPLNGPIHQNIVFLDLPEEEAAFYPYVQQAERIYCAFKDEGYYFETIPSREDFKHYFQY
FAKCPRDELRIGLVRLSKSRKWTKRSINFMHSVFSELDFLVTMEDGLPGVNPNAAKRDLT
EAPTYQRHEARQELEQQYIYSSLAQLKERFDTLVEAAKQEEKTWSSNSI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatgctaaaaaaacatggcttgataaagtcatcgattcagaacaaatcgaacaa
ttgacggcggatggcacaatctcaccgcacgtcgcacaactacttgtccaacggggattc
acaacacgtgaagctgcccgtgattttttagagaccgatcaaatggcatttcatgatcca
tttgctttcaaagacatgccaaaagtcgtcgaacggattcaacgtgccgtcgacgagggc
gagatgattttgatttacggtgattatgatgtcgacggcgtgagttccgctgcgattctc
tggcatgccttgattgaaatcggaggaatggcagagtgttatatcccgaaccgtttcacg
gaaggctatggaccaaacgaagccgcgtttcgctgggctgcagaagaagggttcagcctc
gttatcacggtcgactgtgggatttccggcattcatgaagccgatgtcctaaaggaactc
ggggtcgatttaatcatcaccgatcaccacgaagcaaaagaaacgttacctgatgccttt
gccttaattcacccaggtgtcgatccagactatccgttctcgaagcttgctggggcaggt
gttgcctttaaagtcgcacatgcactccttgaccgtgaacccgtcgagttactcgatctt
gcggtgctcggaacgattgccgatcttgtgccgctcgtcggagagaacaggttgcttgcg
atacgcggcatcgaggcgctgaatgcgagtgaacgcccgggtatccttgcgttacgtgac
gtttgtagtttgacggaagacgaactgacggaagaatcagtcggatttgcattcggtccg
cggatcaatgcggcaggtcgtcttgattcggcgatgccagcgcttgagatgttactagcg
gaaagcaaagatgaggcacttcatctcgcgaaacaactcgaccaacaaaataaacaacgt
caagatatcgtcaagcagattgcggaggaagcaacggcgcttgtcgaagaacgttttaaa
gatgaccgcgtactcgtcgtcgatgcggcagattggaatccaggtgtcgtcgggatcgtc
gcctcgcgactcgttgaaaaataccatcgtcccgtcatcatgctgtgtcatgatgctgaa
aaaggaacagcgaagggttctggacgatcgattccagcctttgatttattcgctgaactc
acgaaatgtgaagatatcttgccgcatttcggaggacatccggctgctgccggcatgacg
ctctcttccgatgacgtcgaggcgttacgtcaacgtttgaatgaacaagcaagtacgttg
ccggacgatgccttcatcgcgacgatcgatgtggatctacgtctacaggtcagtgatgtg
tcgattcagttgattgaagatattcagcgattggcaccgttcgggatgggaaatcccgca
ccacggatcgtcatcgagcaagcgaagatccgtgacatgaaacggatcggtcgtgacttg
acgcatgtcaaagcactactatcaggcgacgggaaggaactcgatgcgatcggcttcggc
ttcggcgaccttgtcgatgaagtctcgaccttatcggagattcacttgatgggcagtctg
aacatcaatgaatggaatgggttccgtaaaccacaattgatgattcaagacgtcgctgtc
gaagatgtccaagtgttcgattaccgcggcggtaagcggccgctgagcgaactattcgcc
ttaccgcatgagacgacgacattcgtcgcctttaccgatgaggtgaaagagaagtacacg
gaacgtccgttgaacggtccgatccatcaaaatatcgttttccttgatctaccggaagaa
gaagcagcattttatccatacgtgcaacaggcagagcggatttattgtgcctttaaggac
gagggatattatttcgagacgattccgtcgcgggaggacttcaagcattacttccagtat
ttcgcgaaatgtccgcgtgacgagctccggatcggtcttgtacgtttgtcgaaatcgcga
aaatggacgaaacgatcgattaactttatgcattcggtattctcggaacttgattttctt
gttacaatggaggacgggctgccgggtgtgaacccaaatgctgcaaagcgagatctgacg
gaagctccaacgtaccagcgtcatgaagcgcgtcaagagctcgagcaacaatacatttat
tcgtcactcgctcagttgaaagagcgttttgatactttggtagaagcggcgaagcaggag
gaaaagacatggagttcaaacagcatataa
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