Exiguobacterium sp. MH3: U719_12280
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Entry
U719_12280 CDS
T02903
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
exm
Exiguobacterium sp. MH3
Pathway
exm03030
DNA replication
exm03430
Mismatch repair
exm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U719_12280
03430 Mismatch repair
U719_12280
03440 Homologous recombination
U719_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exm03032
]
U719_12280
03400 DNA repair and recombination proteins [BR:
exm03400
]
U719_12280
Enzymes [BR:
exm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U719_12280
DNA replication proteins [BR:
exm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U719_12280
DNA repair and recombination proteins [BR:
exm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U719_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
17606783
NCBI-ProteinID:
AHA30429
LinkDB
All DBs
Position
complement(2275335..2278496)
Genome browser
AA seq
1053 aa
AA seq
DB search
MHINVRTQFSPLQSLVRIEPYLDELVRRHIGRAVICETTLTGVPAFIDACQRRNMQPIVG
WEQRIEEEEFCILWFAFSSDGLRQLYRLASQQGETEVSSLIAVLVPLRQASEDATRLRRS
FVQWMGHVQGARTYMGVTSSRSTVERESRARYREVAAALGVETVPVDPVRYIRRDEASAY
QAIRAIGEATTFQDQKTDRLMHLKTREELLEDFTEREITMAEQFATTSERLELPFQQRPL
PRVAEDSNALLRKRAEEGLLAHGHESNEARERLAYELSVIHKTGFADYFLIVEELVRSAK
AKGIFVGPGRGSAAGSLVSYALGITTVDPLKYGLLFERFLNPERISMPDIDIDIEDERRE
EVLEDLVMRYGKDHVAQIGTVSTLGAKAALRDVGRTLEFSKDELDAAVKQLGKSTTLQGI
EQNKQTYRWFSGSEKRRQLLQLAQAVEGLPRQRSVHAAGVVIGSEQLVETTPVETGPNER
YVTQFLMQALERQGLLKIDLLGLRNLSRLRRMEELIRREQPSFTLTQIPEEDRATFQVFA
RAETDDIFQFESTGMKQTLREVKPNRFEDLVATMSLYRPGPMKFIDLYAKRKAGQPYQML
HPVLEDVLAPTYGIIVYQEQVMEITRRVAGFTLAQADLLRRAISKKSTDSLEQERVRFLE
GAKSNGFDDAIAHSLYEQIERFAGYGFNRSHAVAYSKISYALGYIKAHFPHIFLLVSVEQ
PERLVRLMRERRLPVLSPDVWISDYRSSLEGKGIRLGIHVIKGISEREFERVKEASKHTA
TIADLLTHVGWGKKERAKIELLLYSGALDRATHGDRGLAEQEVLEYFTESSNTLLPDELA
ILGKRRTQKSSKRSDSDWARLEREALGFWLTYSPLTTAMKAPVESAYFHDLGVGSETHYL
VCYIDQIREFKTKRGQTMAVIQAVDGYSNEEVVVFPNQYERFRRSLYLGNVLLIELKVQD
REGERQFILERLRPLGQDVLFVKLTSKNELAALEQLLEAVPGDIPVVVRYADSRETKSLP
PLYAVQHDEELLARLRIRFGEDHVVLKNVPRSN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaatgttcgaacgcagtttagtccattgcagagtttagttcgaatcgagccc
tatctcgatgaactagtccgtcgacacatcggacgagcggtcatctgtgaaacgacattg
acaggagttcccgcattcatcgatgcatgtcagcgtcgaaatatgcaaccgatcgtcgga
tgggagcagcgaatcgaagaagaagaattttgtatcttatggtttgctttttcttctgat
ggactgcgtcaactgtatcgactagccagtcaacaaggggagactgaagtttcatcactg
atcgcggtgctcgtgccactgcgtcaagcctctgaagatgcgacgcgtctacgtcgttcc
ttcgttcaatggatgggacatgttcaaggagcgcgtacatatatgggtgtgacctctagt
cgctcaacggtcgaacgagagagtcgtgcgcgttaccgcgaagtcgcagcagcgcttggt
gttgagaccgtcccagtcgatcctgttcgttacatccgtcgagatgaagcgtcagcgtat
caagcgatacgtgcgattggtgaagcgacgacgttccaagaccaaaagacagatcgtctg
atgcatttaaagacccgggaagagttactcgaagactttaccgagcgagaaattacgatg
gcggagcagtttgctacgacatctgaacgcttggaattaccgtttcaacaacgtccactg
ccgcgtgtcgcggaagactcgaatgcgttattacggaaacgtgctgaggaagggttactg
gcacatggtcatgaaagtaatgaagcgcgggaacgtctcgcttatgaactatcagtcatc
cataagacaggatttgccgattattttttaatcgttgaagaactcgtacgtagtgcaaaa
gcgaaaggcatcttcgttggacccggtcgaggctcagcagccggatcacttgtcagctat
gcgcttgggatcacgacggtggatccattgaagtatggattactattcgaacgattctta
aatcccgagcggatttcgatgccggatatcgatatcgatatcgaagatgaacgacgcgaa
gaagtattagaggatctcgtgatgcgttacggaaaagatcacgtcgctcaaatcggtaca
gtgtcgacgctcggtgccaaagccgctctgcgagacgtcggacggacgctggagttttcg
aaggatgagttagatgctgcagtcaagcagcttggaaaatcaacgacgttacaagggatc
gaacaaaacaaacagacatatcgctggttctctggaagcgaaaagcgccggcaactgttg
caactagcgcaagcggtcgagggtctcccgcgacaacgttcggttcacgcggccggtgtc
gtcattggatctgaacagctcgtcgagacgacacccgttgaaacgggaccaaatgaacgc
tatgtgacgcagtttttgatgcaggcattggaacgtcaaggattgttgaaaattgacttg
ttaggattacgaaatctcagtcgtttgcgtcggatggaagaattgattcgacgagaacag
ccatcctttacgctcacgcaaattccagaagaagaccgcgcgacattccaagtctttgcc
cgcgccgagacggatgatattttccaattcgagtcgacaggtatgaaacagacgttgcgc
gaagtcaaaccgaatcggttcgaggatttggtagcaacgatgtcactctatcgtccggga
ccaatgaaattcattgatctgtacgcgaaacgaaaagctggtcaaccttatcagatgttg
catcccgtattagaagacgtacttgcaccaacgtatggcatcatcgtctatcaggaacaa
gtcatggaaatcacccgtcgagtagctggatttacactcgcgcaagcagatttattacga
cgtgcgatttctaaaaaaagtacggattcgctcgaacaggaacgggttcgttttctcgaa
ggagcaaagtcgaatggattcgatgatgcgattgcacattcactctatgaacaaattgag
cgatttgctgggtatggattcaaccgaagccatgcggtcgcctattcaaagattagttac
gccctcggatatatcaaagcgcatttcccacacattttcttactcgtctcggtcgaacaa
ccggagcgtctcgtccgattgatgcgcgaacgacgtcttcctgtcctatcgccggacgtc
tggatttccgattaccgttcttcgttagaaggcaaagggattcgtctcggaatacatgtg
attaaaggtatttccgagcgagagttcgaacgtgtaaaggaagcatcaaagcacacggcg
acgattgctgatctattgacccacgtcggatggggtaagaaggagcgcgcaaaaatcgaa
ttgttactctacagtggtgcgctagaccgagcgacacacggcgatcgcggactcgctgaa
caagaagtactcgaatatttcactgagtcgtcgaatacattacttccagacgagttggca
attctcgggaaacgccggacacagaagtcctcgaaacgaagtgattccgattgggcacga
ttagaacgggaagcgcttgggttctggttgacgtattcgccgttgacgacagcaatgaaa
gctccggttgaatctgcttatttccatgaccttggcgtcggttcggaaacacattattta
gtctgttatattgatcagattcgagaattcaagacgaaacgcggtcaaacgatggcggtc
attcaggcagtcgacggatattcgaatgaagaggtcgtcgtcttcccgaatcaatatgaa
cgattccgtcgatcactttatttagggaacgtcttgctgattgaactaaaggtgcaggat
cgcgaaggggagcgtcagttcattttggaacgtctgcgtccgcttgggcaagatgtgcta
ttcgtcaagttaacatcaaaaaatgagctggccgcactcgaacagttgcttgaagcagta
ccaggcgatattccagtcgtcgttcgctacgcggattcacgcgagacgaaatcgttaccg
ccgctctatgcagtgcagcatgatgaggaattactagctcggctacgtattcggtttggc
gaggatcatgtcgtcctgaaaaatgtcccccgctcaaactag
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