Exiguobacterium sp. U13-1: ESP131_02830
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Entry
ESP131_02830 CDS
T04561
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
exu
Exiguobacterium sp. U13-1
Pathway
exu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESP131_02830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
exu03021
]
ESP131_02830
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_02830
Enzymes [BR:
exu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESP131_02830
Transcription machinery [BR:
exu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESP131_02830
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESP131_02830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AOS99259
LinkDB
All DBs
Position
542773..546372
Genome browser
AA seq
1199 aa
AA seq
DB search
MVDVNRFEYMQIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
YCGKYKRIRYKGIICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDPGESTLEKKQLLSEKEYRAYREKFGRSFTAEMGAEAVRKLLR
DVELDKEVAALREELRMIQGQRRTRAIKRLEVLDAFRNSGNNPEWMVLEVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSRGIAPNIKSAKRKIERVQPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERENAIGEGKIFSTVNEALIAYQNGYAHFHTRVAIP
AGVLKNPTFTEEQNEKLLITTVGKLIFNEILPTTFPYLNEPTMTNLQEATPDKYFLEKGT
DVAAELKNRPIIDPFKKGFLGNVIAEVFKRFETTETSRMLDRMKNLGFKHSTRAGITVGI
ADIIVLPDKQEILVEAQDNVDRVMKSYRRGLITEDERYERVVKSWNDAKDEIQSRLMKSL
NRLNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGRIIELPIKSSFREGLTVQEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGIRVTALREGTEEIESLY
DRLVGRTAFENVVHPETGEVLVSTNELIDEDIARVITDAGVDNVEIRTAFTCNTSHGVCK
KCYGRNLATGNDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIDGQVIDFTESRDKRELTVQGLSETRTYTIPFGSRLRVQLGDEVKAG
QVFTEGSIDPKELLNVKGVSGVQNYLLQEVQKVYRMQGVEIGDKHVEVMVRQMIRRVRVI
ESGETSLLPGSLVDISTFKEACKEALRNGKALASAKPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKSDYLRGLKENVIIGKLVPAGTGMARYRQIDLEVAGEAPVEADSPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttggtagatgttaatagatttgaatatatgcaaatcggcctcgcttcccccgaaaagatc
cgttcatggtctttcggggaagtgaaaaagccggagacgatcaactatcgtacactcaaa
ccggagaaagacggtttgttctgtgaacgtatctttggtccaacgaaagactgggaatgt
tactgtggtaaatacaaacggatccgctataaaggaatcatttgtgaccgctgtggcgtt
gaagtcacgaagtcgaaagtccgtcgtgagcgcatgggtcacatcgagctcgcagcaccg
gtttcgcacatctggtacttcaaaggaattcctagccgtatgggactcgtcctcgacatg
tcaccgcgtgcgttagaagagatcatctacttcgcgtcgtacgtcgtcacagatccaggc
gaatcgacacttgagaagaaacaactcctttcagagaaagaataccgtgcctatcgtgag
aagttcggtcgttcgttcactgctgaaatgggtgcggaagcagttcgtaaattgctccgt
gacgtagaactcgataaagaagtcgctgcattacgtgaagagcttcgtatgattcaagga
caacgtcgtactcgtgcgatcaaacgccttgaagttctcgatgcgttccgtaactcaggc
aacaatccagaatggatggtgcttgaagtacttccagtcatcccaccggaacttcgtccg
atggttcaactcgatggcggacgtttcgcaacgtctgacttgaacgacttgtaccgccgc
gtcatcaaccgtaacaaccgtctcaagcgtcttcttgaccttggcgctccgaatatcatc
gttcagaatgaaaaacggatgcttcaagaagcagtcgatgctttgatcgataacggtcgt
cgcggtcgtccagtcactggaccaggtaaccgtccacttaaatcactttcacacatgttg
aaagggaaacaaggacgtttccgtcaaaacttgctcggtaaacgtgtcgactactctggt
cgttcggttatcgtcgttggtccaaacctgaagatgtatcaatgtggtcttccaaaagaa
atggcccttgagctcttcaaaccgttcgtcatgaaagaactcgtctctcgtggcatcgca
ccgaacatcaagagtgcgaaacggaaaatcgagcgcgttcaacctgaaatctgggatgtc
ctcgaagaagtcatccgtgagcatccggttctcttgaaccgtgcaccgacacttcaccgt
ctcggtatccaggcgttcgaaccaacgctcgtcgaaggacgcgcgattcgccttcaccca
ctcgtatgtacggcatacaacgccgacttcgatggtgaccaaatggcggttcacgtacca
ctttcggcagaagcacaagcagaagcacgtcttctcatgctcgctgcacaaaacatcttg
aacccgaaagacggtaaacctgttgttacaccatcgcaggatatggtcctcggtaactac
tacctcacgctcgagcgcgaaaacgcgatcggcgaaggtaaaatcttctcgacagtgaac
gaagcgctcatcgcttaccaaaacggttatgcgcacttccatacacgtgttgcgattcca
gccggcgttctcaagaacccgacattcacggaagagcaaaacgagaaattattgattaca
acagtcggtaagttgatcttcaacgagatcctcccaacgacgttcccttacttgaacgaa
ccaacgatgacgaaccttcaagaagcgacgccagacaagtacttccttgaaaaaggaaca
gatgtcgcggcagaactgaagaaccgtccgatcatcgacccgttcaaaaaaggattcctt
ggaaatgtcatcgcggaagtcttcaaacggtttgagacgacagaaacaagccgcatgctc
gaccgcatgaaaaacctcggattcaaacactcgactcgtgccggtatcacggtagggatc
gcggacatcatcgttcttccggacaaacaagagattcttgttgaagcgcaggacaatgtc
gaccgcgtcatgaaatcgtaccgtcgtggtctcatcacagaagacgagcgctatgagcgt
gtcgttaaatcgtggaatgatgcgaaggatgaaattcagtctcgtctgatgaaatccctc
aaccgtcttaacccgatcttcatgatgagtgactccggtgcccgtggtaacgcgtcgaac
ttcacgcagctcgctggtatgcgtggactcatggccgctccaagtggacggatcatcgag
ctcccgatcaaatcatcgttccgtgagggtctaacggtacaggaatacttcatctcgaca
cacggtgcacgtaaaggtcttgccgatacagccttgaaaacggctgactcaggttacctg
actcgtcgtctcgttgacgttgctcaagacgtcatcatccgtgaagatgattgtggaacg
gatcgtggtatccgcgtcacagcactccgtgaaggaacggaagagatcgaaagcctctac
gaccgcctcgtcggacgtactgcattcgaaaacgtcgttcacccagaaacaggagaagtc
ctcgtttcaacgaacgaactcatcgatgaagacatcgctcgtgtcatcactgatgctggt
gtcgataacgttgagatccgtactgccttcacatgtaacacaagccatggtgtctgtaag
aaatgttacggacgtaacttggcaacaggcaacgacgtcgaagtcggcgaagctgtcggt
atcatcgcggcacaatcaatcggtgagccaggaacgcagcttacaatgcgtaccttccac
acaggtggggttgccggggatgatatcacacaaggtcttccgcgtatccaagagttgttc
gaagcgcgtaacccgaaaggtcaagcggtcatttcggaaatcgatggtcaagtcatcgac
ttcacggaatcgcgtgacaaacgtgaattgacggtccaaggactcagcgaaacacgcaca
tacacgatcccattcggttcgcgtctacgtgttcagctcggggacgaggtcaaagccggt
caagtcttcacggaaggttcgatcgatccgaaagaactcttgaacgttaaaggtgtatcc
ggcgttcagaactacttgctccaagaagttcaaaaagtataccggatgcaaggggttgag
atcggtgacaaacacgtcgaggtcatggttcgccaaatgatccgtcgcgtacgtgtcatc
gagtctggtgagacttcactcttaccaggttcgctcgtcgatatcagcacgttcaaggaa
gcttgtaaagaagcgctccgtaacgggaaagctctcgcttcggcgaaaccagttcttctc
ggtatcacgaaagcgtcacttgaaacagattcattcctatcggctgcgtcgttccaagaa
acgactcgtgtccttacggatgcagcgattaaagggaagagcgactaccttcgcggcttg
aaagagaacgtcatcatcggtaagttggttccagctggtactgggatggcacgttaccgt
cagatcgatctcgaagtagctggcgaagcacctgtagaagccgattctccggtagaataa
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integrated database retrieval system
