Exiguobacterium sp. U13-1: ESP131_06170
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Entry
ESP131_06170 CDS
T04561
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
exu
Exiguobacterium sp. U13-1
Pathway
exu03420
Nucleotide excision repair
exu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ESP131_06170
03430 Mismatch repair
ESP131_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_06170
Enzymes [BR:
exu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESP131_06170
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ESP131_06170
MMR (mismatch excision repair)
Other MMR factors
ESP131_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
NPHP3_N
AAA_11
ResIII
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AOS99863
LinkDB
All DBs
Position
complement(1203667..1205829)
Genome browser
AA seq
720 aa
AA seq
DB search
MHEDFFEQMERLTGIQLNPVQQQAIEHDHGPLLLLASPGSGKTTTLNFKIAYLILQKKIE
PHRILGLTFSKAAAREMADRFYHLFHELIGTTAAFSTIHSFAFQVVRDHTSQQRLSYTII
EGPMDQQHPNAPHKRMLLRRIFQEMNRSVITDDQMDELLRMISFVKNRLLSLKEIKAVPT
TIKHFPDIYVAYEQFKSRDPLHPLLDFDDMLTYANTILEQDRRLLQHYQRRFDYILTDES
QDTSLVQHQLVEKLALPHNRLCVVADDDQTLYSWRGADASKILHFKDTYPNATILYMEQN
YRSSQDIVSVANQFIQRNKARYPKQMFTENAAVRPIILETLPTYEDQTRYLLNQLRTETN
YREVAILYRNNASSINVMNALDQANIPFYIKDVDHKFFSHWILKDILNFMTFAQDPTDIE
ILATIHTKFAGYISKAQLAQLQQFGTGESLFDLLINKIEMKFYQKKQLQQMKRTFASIQT
VRPSAALSLIRHELGYEKNLRKMSESLGFSLDHLLETLNTIDNIASDVPTLLAFRERISH
LEQLMRDAKQNKNQNAVTLSTFHSAKGLEFDRVFMIDLVAGILPSADTIKAYKNGQLDDM
EEAARLFYVGMTRARHELHLLSYRFKSKSFDVSPFVEDVHRLVTPDAAKRKVERHRPAVT
ARASIPPLPITENMRVSHTAFGPGTVLHLVDDVLEISFDQGMKKQLSLQVCSENALLEIL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagattttttcgaacagatggagcgattgaccggcattcaactgaatcctgtt
caacaacaggcaatcgaacatgaccatggtccgttgctgttactcgcctcacccggctct
ggaaaaacaacgacgcttaattttaaaattgcctatttgattttacaaaaaaagatcgaa
ccacatcgtattctagggctgaccttcagtaaagcggcagcgcgtgagatggcggatcga
ttttatcacttattccatgagctaatcggaacaacggcagctttttcaacgatccatagt
tttgcttttcaagtcgttcgggatcatacatcccagcaacgtctctcctatacgatcatc
gaaggaccgatggatcaacaacatccgaatgcgccacataaacgcatgttactccggcgt
attttccaggaaatgaatcggagtgtcattactgatgatcagatggatgagttattacgg
atgatttccttcgtcaagaaccgtctcctgtctttaaaggaaatcaaggcagtaccgacg
acgattaaacattttcctgatatctatgtggcatatgaacaatttaagtcgcgtgatccc
ttacatccgttactcgactttgacgatatgttgacgtatgcaaatacgattttggagcaa
gaccgtcgtctgttgcaacattatcagcgacgctttgactatattttaacggatgagagt
caggatacgtcactcgtccagcatcaattggtcgagaagttagccttaccacacaaccgt
ctatgtgtcgtcgcggatgatgaccaaacactgtacagttggcgtggtgcagatgcttcg
aaaatccttcatttcaaggatacgtatccgaatgcgacgattctttatatggagcaaaat
tatcgttcgtctcaagacatcgtatccgtcgcgaaccaattcattcagcgcaataaagca
cgctatccgaaacagatgttcacggagaacgctgctgttcgtccaatcatcttagagacg
ctaccgacttatgaagatcagacccgctatctgttgaatcagttacggacagagacaaat
tatcgtgaagtagccatcttatatcgcaacaacgcttcttcaattaacgtcatgaatgcg
ttagatcaagcaaatatccctttctacattaaggatgttgatcataaattcttcagtcat
tggattttgaaggatattttaaatttcatgacattcgcacaagatccaacagatatcgag
attctagcaaccatccatacgaaattcgccgggtatatctcaaaagcgcaactggctcaa
ttgcagcagttcggtacgggtgagtctttgtttgatctgcttataaataaaatcgagatg
aagttctatcaaaagaaacaactccagcaaatgaaacggacgtttgcttccattcagacc
gttcgtccgtctgctgcgctttccctcattcgtcatgaattaggatacgaaaagaattta
cggaaaatgagtgagagtcttggttttagcctcgatcatctgctcgaaacattgaatacg
atcgataatatcgcaagcgatgtaccgacgttacttgcctttcgcgaacgaatatcgcat
cttgaacagttaatgcgtgatgcgaaacaaaataaaaatcaaaatgcggtcaccctctcg
accttccacagtgcgaaaggactcgaattcgatcgtgtcttcatgatcgatctcgtcgca
gggattctaccgtcagctgatacgattaaagcttataagaatgggcaactcgatgatatg
gaagaagcagcgcgcttgttttacgtcggcatgacaagggcaagacatgaactacatctc
ctgtcctatcgttttaaatcaaaatcatttgatgtctcgccattcgtcgaagacgtccat
cgtcttgtcacgcctgacgctgcaaaacgaaaagtagagcgccatcgccctgctgttaca
gcgcgagctagcattcctccactaccgatcactgagaacatgcgtgtctcgcatacagca
tttggtcctggaaccgtcttgcacctggttgacgacgtgctagaaatttcatttgatcaa
ggaatgaaaaaacagctttcgttacaagtctgctctgaaaatgcattactcgaaatttta
tga
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