Exiguobacterium sp. U13-1: ESP131_06285
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Entry
ESP131_06285 CDS
T04561
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
exu
Exiguobacterium sp. U13-1
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_06285
Enzymes [BR:
exu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ESP131_06285
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ESP131_06285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
D5_N
ECSIT_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOS99885
LinkDB
All DBs
Position
1227257..1230688
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AA seq
1143 aa
AA seq
DB search
MNHMHIGRAGSGKTTQLIERVVQELEQRPLGEKMYFIVPDQMSFEMERRIATDDRIAGLV
RLEVMSLRRFAFHILRDYGNQAIPFLDETGTQLLLRQVVEESEDELKIFKRTKNMPGFFQ
GLDELIASFKRSLIEPDMLRQVSDRSLERSPKLNDLALIYERFTERIVDKALHADDYYTT
LLELLPKARLDQATIIVDGFYEFSLQEQQVLLALMQQVAEMHISFTMDPTDPYAKQTSFG
VSQRCYMQLIGQMQELSIPYEEILYDQPIKFQSEGLRHLEQALLKPGYPAVDHDVDGFQM
TAAVNRQVEAESAVRKAIQLVRQKGYRFHEMAFVVRHLEPYADHLERAFHMYDVPYFLDQ
RESMVHHPLIDLIQSALDIVTSGYREETVFRLLKTELLPIPAEDARLALDRFETFVLERG
IKGSMWQQPWQLKRRLAEEVRLTEEELAQEEELNDLRTFVVDLIEPLHRRLKQAKTMSAY
TKGLYQFLEEQKIAERLMEWRKQALEQDQLLVAREHDQVYEAILHLFEQLEAAAPEHTLS
TELFVQMVETGLESLRFALVPPSLDQVIATDYVRGRLQRVKVVFLLGANDGLIPFVQDQS
KLLSENDHDFLHEHGIPVGKASLDVFDDELFYLYQGMMAPSEALYVSYALVDEEGKALQP
AAITKQLKRQLLLDRPIKTHFAEAGEHAPQEQLDFVTSPDRAAAATAIELRRLQRRYPIQ
PIWFEVYNTLLENGQGRERMGLFSNALFYQNQAEALPEGLAHRLYGESLQASVSRFETYN
ACSYKHFARYGLRLRERKLYKFEAPDIGNLFHGALNDLSLSIKASGRHWRELDGETCGTL
AKEAVEKVTPEIQNAILMSSSRFGYIKKKLTDVVEQTAKMLVEQAKRTDFEPDLFEISFG
NATFPPLRFTLPDGTEIEFTGRIDRIDQATIGDQLYVRIIDYKSSARGLDFAEIYYGLAI
QMLLYLKTVVEQSELLYQQQAKPAGALYFHVKNPMLRGDLSADEEERNRLLLESYQMQGV
ILENDEVLRAMDHIAYDERKKSPLVKVTFTKNGLHKTQTKGVVQEEDLSALMDHAWEALK
DSSQDIYDGDIAINPFDYQERTPCSFCEYRSVCQFDESLGNQYRPLKTMSEKEVLERLKE
EEE
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatatgcatattggtcgtgccggtagtgggaaaacgacacaattgatcgagcgc
gtcgtacaagaactcgagcaacgaccgctaggggagaagatgtatttcatcgttccggat
cagatgtcatttgaaatggagcggcggattgcgacagatgaccggatagcaggtcttgtt
cgtcttgaggtcatgagtctacggcgctttgcgtttcatatcttacgcgattacgggaat
caagcgattccatttctcgatgagacagggacacagctattactgcgacaggtcgtcgag
gaatcagaagacgaactgaagatttttaaacgaactaaaaacatgccaggatttttccaa
ggacttgatgagctcatcgcgtcgtttaaacgctcgctgattgaaccagatatgttgcgt
caagtgagtgatcgttctctcgaacggtcaccgaaattgaacgatcttgctttgatttat
gagcgctttacggaacgcatcgtcgataaagcactccatgcggacgattactatacgacg
ttacttgaattacttccaaaagcacgactggatcaagcgacgatcatcgtcgacggattt
tatgaattttcgcttcaggaacaacaagtactgctcgccttgatgcaacaagtggctgaa
atgcatattagttttacgatggacccaacggatccttatgcgaaacaaacctcttttggt
gtgtctcagcgatgctacatgcagttgatcggtcagatgcaggagctgtcgattccatac
gaagaaatcttgtacgatcaaccaatcaagtttcaatcagaagggctacgacatttggag
caggccttgttgaagccgggatatcccgctgtcgatcatgacgttgacggctttcagatg
acagctgcagttaaccgtcaagtcgaagcagaatcagccgtgcggaaagcgattcaactc
gttcgacaaaaagggtatcgttttcatgaaatggcattcgtcgtgcgacatcttgagccg
tatgcggatcacttggaacgagccttccacatgtacgatgttccgtatttcttggatcaa
cgtgagtcgatggttcatcatccgctcattgacttgattcaatctgctttagacatcgtg
acgtcgggttatcgggaagaaacagtctttcgtttactgaagacggagctcttgccgatt
ccagcagaagatgcgcgtctagcgctcgatcgtttcgagacgttcgtgctcgaacgcggc
atcaaaggatcgatgtggcaacaaccatggcaattaaagcgacgcctagcagaggaagtt
cgcttaacggaagaagagcttgcgcaagaagaagaactgaacgatttacgaaccttcgtc
gtcgacttgattgaaccattgcaccgtcggttgaagcaggcaaagacaatgagcgcgtat
acgaaaggtctttatcaattccttgaagaacaaaaaattgcagaacgtttaatggaatgg
cgtaagcaggcactagagcaggatcagttacttgttgctcgagagcacgatcaagtgtac
gaagcgatactccatctattcgaacagctagaagctgctgcgcctgagcataccttgtca
acggaactgtttgttcagatggtcgagacaggacttgagagccttcgttttgcacttgtt
cctccatcgcttgatcaagttatcgcgacggactatgtccgtggacgattacaacgagtg
aaagtcgtctttttactgggagcgaatgatggtctgattccgttcgttcaagatcaatca
aagttactgtccgaaaatgatcatgacttcttacatgaacatggtattccggttggaaaa
gcgtctcttgacgtgtttgatgatgagctgttttacctgtatcaagggatgatggctcca
agtgaagcattgtatgttagttacgcacttgtcgatgaagaaggaaaggcgcttcagccg
gcagcgatcacaaaacaattaaagcgacaactgttgctcgatcgtccgatcaaaacacac
tttgcagaagctggagaacatgcaccgcaagaacaacttgatttcgtgacgagcccagat
cgcgcggcagcagcgacagcgattgaactccggcgtctgcaacgacgttatccgatccag
ccaatttggttcgaagtgtataatacgcttctcgaaaacggacagggacgtgaacggatg
ggattattctcgaatgccttgttctatcaaaatcaagcggaagccttgccggaaggattg
gcgcatcgtttatatggtgagtcactgcaagcaagcgtttcgcgttttgagacctataat
gcctgttcgtataagcattttgcacgatacggccttcgtttacgcgagcgaaaactgtat
aaattcgaagcaccggacattgggaatctgttccacggtgcactgaatgatctgtcgctc
agtattaaagcttctggacgacactggcgcgagctcgatggcgagacgtgcggaacactt
gcgaaggaagctgttgaaaaggtgacacctgaaattcagaatgcgattttgatgagttcg
agtcggttcgggtatatcaagaaaaaattgacggatgtcgtcgaacaaacagctaaaatg
cttgttgaacaagcaaaacgaacagattttgaacctgacttatttgaaatcagttttggg
aacgcgacgttcccaccattacgctttacattgccggatggaacagaaattgaattcacg
ggtcgcatcgaccggattgatcaggcgacgattggtgatcagctatacgttcgaatcatt
gattataaatcaagtgctcgaggacttgattttgcggaaatctattatgggcttgcgatt
cagatgttgttgtatttgaagacggtcgtggaacagtcggagctgctttatcaacagcag
gcaaaaccagctggtgcgttatatttccacgtcaaaaaccccatgttgcggggcgattta
tcggctgacgaagaagaacgcaaccgactgttactcgagtcctatcaaatgcaaggcgtc
atcctcgagaatgacgaagtactacgagcgatggatcatattgcgtacgatgaacgaaaa
aaatcaccgcttgtcaaagtgacattcacgaaaaacggactgcataagacgcagacgaaa
ggtgtcgtacaggaggaagatttatcagcgctgatggatcatgcatgggaggcactaaaa
gacagcagtcaagacatctatgatggggatatcgctatcaatccatttgattatcaagag
cggactccgtgtagtttttgtgagtatcgttcagtctgtcagttcgatgaatcgcttggg
aatcagtatcgcccattaaagacgatgtctgaaaaagaggtactggaacggttgaaggag
gaagaagaatga
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