Exiguobacterium sp. U13-1: ESP131_06810
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Entry
ESP131_06810 CDS
T04561
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
exu
Exiguobacterium sp. U13-1
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exu03019
]
ESP131_06810
03009 Ribosome biogenesis [BR:
exu03009
]
ESP131_06810
Enzymes [BR:
exu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ESP131_06810
Messenger RNA biogenesis [BR:
exu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESP131_06810
Ribosome biogenesis [BR:
exu03009
]
Prokaryotic type
rRNA helicases
ESP131_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOS99984
LinkDB
All DBs
Position
1347145..1348497
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AA seq
450 aa
AA seq
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MNGFSHYQLHPFVIEALDDARITKPTDIQSRIIPAAVKGRDIIGQSQTGTGKTLSFLLPI
VQNVDPKLQELQAIIVAPTRELAWQIHEELKSLLVKEPDFIKTSLITGGMDRERQIGRVK
VSPQIVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEQLQM
MVFSATIPEKLQPFLKKYMNNPRYAHVDPKQQTAKKIVHHTIPVKHRERSQLTLKVAKAL
NPYICLIFTNTKAEAIEVEALFLEAGLNVGSLHGDLPARRRKQAIKEINDAKYQYVIVTD
LAARGIDISGVSHVINHGIPKDLDFYIHRVGRTGRVDQDGLAYTLFEDHENGMINRLEDR
GIQFTNVDVKGSQIVEVKERRRAKPHMKTAVSKTAHSRLSGEAAKAKKRVKPGYKKKHQY
KLKETAKRERIKEQRGVGRAQRKENARKSK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatggattcagccattatcaattacacccgttcgtcatcgaagcactcgatgacgcc
cgcatcacaaaaccgaccgacattcagtcgcggatcatccccgctgcagtaaagggacgc
gatatcatcggtcaatcacaaaccggcacaggaaaaacgttatcgttccttcttccgatc
gttcaaaacgtcgatccaaagcttcaagaattacaagcgatcatcgttgctccaacgcgc
gaacttgcttggcaaattcatgaagaactgaaatcgttactcgtgaaggaaccagacttc
atcaagacgagtctcattacaggtggaatggatcgcgaacgtcaaatcggtcgtgtgaaa
gtctcaccacaaatcgtcatcggaacaccgggacgtattctagatttattcaaggaacaa
gcattgaagccacatttcgtgaagcattatatcatcgatgaagcggatcaaatgctcgac
atgggcttcttgccagaagttgaccggattgcgcaagctcttccagaacagcttcagatg
atggtcttctcagcaacgattcctgagaaattgcaaccgttcttgaaaaaatatatgaat
aacccgcgttatgcgcatgtggatccaaaacaacagacagcgaagaaaatcgttcaccat
acgattccggtaaagcaccgtgagcgctcgcaattgacgttgaaagtcgcgaaagcgttg
aatccgtatatctgtttgatctttacgaatacaaaagcagaagcaatcgaagtcgaagct
ttgttcttagaagcaggattgaacgttggttctcttcacggagaccttccggctcgtcgt
cgtaagcaagccatcaaagaaatcaacgatgcgaagtatcaatacgtcatcgtgacggat
cttgctgcacgtggaattgatatttcaggtgtctcgcacgtcatcaaccatggtattcca
aaagatttagacttctacatccaccgtgtaggtcggacaggtcgtgtcgatcaagatgga
ttggcgtacacattgtttgaagatcacgagaacggtatgatcaatcgcttagaggaccgt
ggcattcaattcacgaacgtcgatgtcaaaggtagtcaaatcgtcgaagtcaaagaacgt
cgccgtgcgaagccgcacatgaagactgccgtctcgaagacagcgcatagtcgcctttcg
ggtgaagcagcaaaagcgaaaaaacgtgttaaaccaggttataagaagaaacatcaatac
aagctgaaagaaacagcaaaacgtgaacgcatcaaagaacaacgtggtgtcggtcgcgcg
caacgtaaagaaaacgcacgcaaatcaaaataa
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