Exiguobacterium sp. U13-1: ESP131_12055
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Entry
ESP131_12055 CDS
T04561
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
exu
Exiguobacterium sp. U13-1
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exu03019
]
ESP131_12055
Messenger RNA biogenesis [BR:
exu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ESP131_12055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
AOT00955
LinkDB
All DBs
Position
complement(2304486..2305676)
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AA seq
396 aa
AA seq
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MIQLFKALPEVTMPPYENVDFSINQSNQPIGFSIDTCAPGERVEEVLLVASGEIRTGQTG
REWLQFTFNSPAGSCKGKQWINQGTAEEALRPYLETRIVRVEAKVEEYPPQSGNKSLTVQ
RVTPIHDASPTQFLPQLPAGESLETYRDQLLGLVGQLDSPHQEIALSILRQYWADFSTRP
AALFHHHAYIGGLLKHTACMMTIGRGICDSEQPYLTLLKCIQEAEADHKNELFQAAEREI
RQFSWDDSFDALYQAAKGIALLDQRPNPNELLLGILLHDIGKLWEYTHAGASADRFSRLL
HVTEEEEELAGIALDLDGVLMGHMPYGCFVLEQTLREEDIRLPRAVYHRLMHMVLSHHGK
REWGSSVTPQTTDAWYLHAIDLLDARKEKWRQQQGR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaattatttaaggcacttccagaagtgacgatgcctccttatgaaaatgttgat
ttttccattaatcagtcgaatcaaccgattggattttcgattgatacatgtgctcccggt
gaacgagtggaagaggtcctacttgttgcctctggtgaaatccgtactggtcaaaccgga
cgagaatggttacaattcacgttcaattcgcccgctggatcttgtaagggaaaacaatgg
atcaatcaaggaacggcagaagaagcacttcgtccctatctcgaaacacgaatcgttcgg
gtcgaggcaaaggtagaggaatatccgccgcaatccggaaacaaatcattgaccgttcag
cgtgtcactccgattcatgatgcctcaccgacgcagttcttgccacagttacctgcaggt
gaatcgcttgaaacataccgtgatcagttgcttggattagtcggtcagcttgattctcct
catcaagaaatcgcgctctcgattttgcgacagtactgggcagatttttcgacacgaccg
gctgctctttttcatcaccatgcctatatcggtgggttgctgaaacacactgcttgtatg
atgacgattggtcgaggaatttgtgatagtgaacaaccatacttgacgctactcaaatgt
attcaagaagcagaagccgatcataaaaatgaactattccaagcagctgaacgagagata
cgtcaattttcttgggatgatagttttgatgctctctatcaagcggcaaaagggattgca
ctgttagatcaacgtccaaatccgaacgaattgttactcggcattttattgcatgacatc
ggaaagctatgggagtatacacatgcaggggcttcggcagatcgtttttcaagactgctg
cacgtaacagaggaagaggaagaactggcgggcattgcgcttgatctggacggcgtgttg
atggggcatatgccatatggatgttttgttctcgaacaaacacttcgagaagaagatatc
cgattaccgcgtgctgtttatcaccgtctcatgcatatggtattatcacaccatggtaaa
cgcgagtggggatcaagtgttacgccgcaaacgacagatgcttggtatctccatgcgatc
gatctactcgatgcacgaaaagaaaaatggcgtcagcaacaaggacgctaa
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