Exiguobacterium sp. U13-1: ESP131_12770
Help
Entry
ESP131_12770 CDS
T04561
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
exu
Exiguobacterium sp. U13-1
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
exu03032
]
ESP131_12770
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_12770
Enzymes [BR:
exu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ESP131_12770
DNA replication proteins [BR:
exu03032
]
Prokaryotic type
DNA Topoisomerases
ESP131_12770
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ESP131_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Zn_ribbon_RPB9
DUF3970
Cys_rich_CPXG
Toprim_3
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
AOT01090
LinkDB
All DBs
Position
complement(2441892..2443988)
Genome browser
AA seq
698 aa
AA seq
DB search
MAKYLVIVESPAKAKTIKRYLGSNYTVKASMGHVIDLPKSQMGVDVEHDYEPKYITIRGK
GPVLKELKTAAKKAQKIYLAADPDREGEAIAWHLAKALGVDESTECRVVFNEITKDAIKD
SFKRPRKLNYDLVDAQQARRILDRLVGYSMSPLLWKKIKKGLSAGRVQSVAVKMIIDREQ
EINAFMPEEYWTIKLELDANGEKLEANFYGVDGKKRELHSQEEVDQILNQLSEDFTVDSV
TKKERKRNPALPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIEIGKEGTVGLITYMRT
DSTRTSDSANLEAHGFIEQAYGKEYIASEKRKEKKSANSQDAHEAVRPTSTMREPQLVKS
YLSRDQFRLYKLIWERFVASQMAPAILDTVKIDLVSNDVTFRANGSTVKFPGFMKVYIED
TDDEAVSDVKEGLLPPLDEGEELKQSAIEPKQHFTQPPPRYTEARLVRAMEELGIGRPST
YAPTLDTIQKRGYVTLEEKKFLPTELGELVIDMISDYFQEFITVQFTADMEALLDAIEKG
DMQWTEVVDPIYKSFAKRLTRAEAEIEKIEIKDEPAGEDCEVCGHPMVIKMGRYGKFMAC
SNFPECRNTKPIQVEIGVKCPTCGTGDIVERRSKKGRLFYGCSNYPECEFVSWDKPVEEP
CPVCSSMMVQKKIKNGVKVECTSCGHHETRIDQEQEEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatctagtaatcgtcgagtcacccgctaaggcaaaaaccatcaaacgttat
ctcggatccaactataccgtgaaagcgtcgatggggcacgtcattgacttgccgaaaagc
caaatgggagtcgacgtcgaacatgactatgaaccgaaatatatcacgatccgtggtaaa
ggtccggtcttaaaagaactcaagacagctgcgaaaaaagcacaaaaaatctatctcgca
gccgaccccgaccgtgaaggggaagcgatcgcatggcatttagccaaagcattaggcgtt
gatgaatcaacggagtgccgcgtcgtcttcaatgaaatcacgaaagatgccatcaaggat
tcgttcaagcgaccacgcaagctcaactatgatcttgtcgatgcacagcaagcccgtcgt
atcttggaccgccttgttggttacagcatgagtccgttattatggaagaagattaaaaaa
gggttatctgcgggacgcgttcaatccgttgccgtcaagatgatcattgatcgggaacaa
gaaatcaacgcgttcatgcctgaagaatactggacgatcaaactcgaactcgatgcaaac
ggtgaaaagctcgaagcgaacttctatggagtcgatggcaagaagcgtgaacttcattcg
caagaagaagtcgatcaaatcttgaatcaactctcggaagacttcacagttgattccgtc
acgaaaaaagagcggaaacggaatccggcgttaccgtttacgacgagttccctgcaacag
gaagcagcacgtaagctgaacttccgagcaaagaagacgatgatgatcgcacaacagcta
tacgaaggaatcgagattggaaaagaaggtacagtcggtttgatcacgtatatgcgtacc
gattcgacacggacgtcagattcggcgaaccttgaagcacacgggttcattgagcaggcg
tacggaaaagaatacatcgcaagcgagaaacgcaaagaaaaaaaatcagcgaactcacaa
gatgcgcacgaagcagttcgtccgacttcgacgatgcgcgagccacaactcgtcaaatcg
tatttatcgcgtgatcagttccgcttatataaactaatttgggaacggttcgtcgcaagt
cagatggcgccagcgattctcgataccgtcaagatcgatctcgtctcgaacgacgtcact
ttccgtgccaacgggtcgaccgttaaattcccaggcttcatgaaggtctacatcgaagat
acggacgatgaggcggtttcagacgtcaaggaaggattacttcctccactcgatgaaggg
gaagagttaaaacaatcagcaatcgaaccgaaacaacacttcacccaaccaccgccacgt
tatacggaagcacgtcttgtccgggcgatggaagaactcggcatcggtcgtccgtcgacg
tatgcgccgacgctcgatacgattcaaaaacggggttacgtgacgcttgaagagaagaaa
ttcttaccaacggaacttggtgaactcgtcatcgatatgatcagcgactatttccaagag
ttcatcactgtccagttcactgcagacatggaagctttactcgatgcgatcgaaaaaggt
gacatgcagtggacggaagtcgtcgatccaatctacaagtcctttgcaaagcgtctgaca
cgagcagaagcagaaatcgagaagattgaaatcaaagatgaaccggctggagaagattgt
gaagtctgtggtcatccgatggtcatcaagatgggacgttatggcaagttcatggcgtgc
tcgaacttcccagagtgtcgtaacacaaaaccgatccaagtcgagatcggtgtgaagtgt
ccgacatgtggaacgggcgacatcgtcgaacgtcgtagtaaaaaaggacgtttgttctac
ggttgttcgaactatccggaatgtgagttcgtctcatgggataaaccggtcgaagaacca
tgtccggtatgtagcagtatgatggtacaaaagaaaatcaagaacggtgtgaaagtagaa
tgtacatcttgtggacatcatgaaacacgcatcgatcaggagcaagaggaggaatga
DBGET
integrated database retrieval system
