Exiguobacterium sp. U13-1: ESP131_13700
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Entry
ESP131_13700 CDS
T04561
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
exu
Exiguobacterium sp. U13-1
Pathway
exu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ESP131_13700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_13700
Enzymes [BR:
exu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ESP131_13700
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ESP131_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
HHH_5
UvrD_C
AAA_22
UvrD-helicase
AAA_16
AAA_28
AAA
SBP_bac_3
NTPase_1
TsaE
nSTAND3
AAA_5
AAA_25
TrwB_AAD_bind
NPHP3_N
SLFN-g3_helicase
T2SSE
Helicase_RecD
KTI12
AAA_23
DEAD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AOT01267
LinkDB
All DBs
Position
complement(2622888..2625113)
Genome browser
AA seq
741 aa
AA seq
DB search
MEHPHQVVGRVKRVLFSSEEEAHSIVLVAVKEKNFELKETELVITGTGVGIELGGTYQAF
GRLVDHPRFGKQLKAELIRRSVPMTKQATIRFLTNGSFTGIGPKTAKNIVDALGEEAVDL
ILKDERVLNQVPGLKQKQADIILSRLATLYGVDQLMLFLAPFDVTPKLAAKIYAAYEGDA
MARIRENPYSLMYEVNGIGFKTADHIASHLGLVGLHPERVAASIMHILEQEAGEGHAFAT
VDSLLQRAPRLLGEDPGERLEQAIELLLAEDKVKLEEGCLYLPTIFYAEVRAAKELARVM
ANGAEQEVDVATILEAIGHLEEQFGMEYAAQQREAIELAVKAPLMVLTGGPGTGKTTVIK
GILHALQEIHDWPLEKSRVKTGDVYPYVLVAPTGRAAKRLSEATDVPAMTIHRLLKYDGT
NFQLNEDQPITGKVLIIDESSMIDIYLLSSLLRAVPNGMKILFVGDRDQLPSVGPGQVLA
DLMDTEGIPVVRLNVVHRQAEDSSILRLAHDLKNRTTSADLLAPLADRRFYTASPQETLR
GISAFAEKALAKGYSKFDVQILAPTYRGQVGIDELNVALQRVYNPEEPKKREVKQGTRIY
RTGDKILQLVNNAEENVYNGDIGEIVNIFFAKENVDKVDKIIARFDQTEVEYNRSDWDQF
THAYAITIHKAQGSEFPIVLMPVYFTGAFKHSRNLIYTAVTRAKSSLLLFGDPRAFHKAS
QEEEPRRRTRLIERLGGVTKT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggagcacccccatcaagtcgtcgggcgcgtcaaacgtgtgctcttttcttctgaagaa
gaagcacactccattgtattggtcgccgtcaaagaaaaaaactttgaactgaaagaaacc
gagctcgtcatcacgggtacaggggtcggaatcgaactcggaggaacgtatcaagcattt
ggtcgtctcgttgatcatcctcgcttcggaaaacaactgaaggcggagctgattcgtcga
tcggttccgatgacaaaacaggcaacgatccgcttcttgacgaatggttcgttcaccggc
attggtccgaagacagcgaaaaatatcgtcgatgctctcggagaagaggcagtggacctc
attttgaaggatgagcgagtactgaatcaggtgcctgggttaaaacaaaaacaagcggat
atcatattgagtcgactcgctacgttatacggtgtcgatcagttgatgctattcttagcg
ccatttgatgtcacaccaaaactagcggcgaaaatctatgctgcttacgaaggggacgcc
atggcgcgaattcgagagaatccgtattccttgatgtatgaagtgaacgggattggtttt
aagacagccgatcatatcgcctcacatctcggacttgtcggattacatccggaacgtgtc
gctgcttcgatcatgcatatattagaacaagaagcaggagagggacatgcctttgcgacg
gtcgactcactattacaacgggcaccccggttgcttggtgaagacccaggagaacggctg
gaacaagcgattgaactgttgctcgctgaagataaggtcaagcttgaagaaggttgtttg
tatttaccgacgatcttttatgcggaagttcgagcggcgaaagaactggctcgcgtcatg
gcgaacggtgccgaacaggaagtcgatgtcgcgacgattcttgaagcgattgggcacctc
gaagaacagtttggcatggaatatgccgcacagcagcgggaagcgatcgagttagcggtt
aaagcaccattgatggttctgaccggtggaccagggaccggtaagacgaccgtcatcaag
ggaattttacatgccttgcaagaaattcatgattggccacttgagaaaagtcgcgtcaag
acgggagatgtctatccgtatgtccttgttgcaccgaccggacgcgccgctaaacgtttg
tcggaagcaacggacgttccagcgatgacgattcatcgtctgttgaagtatgacggaacg
aacttccaactgaatgaagatcagccgatcacgggaaaagtactgatcatcgatgagtca
tcaatgattgatatctacttgttatcgagtctgctccgtgctgttccgaacggtatgaaa
attttgttcgtcggtgaccgcgatcagttgccatccgtaggtcctgggcaggtactggca
gacttgatggacacggaagggattcccgtcgttcgtctgaacgtcgtccatcgccaagcg
gaagattcttcgattttacggcttgcccatgatttgaagaaccggacgacgtctgctgat
ttgttggcaccacttgcggatcgtcgcttctataccgcgtctccgcaagagacgttacgc
ggtatttcagctttcgcagaaaaagcacttgcgaaaggctattcgaaattcgatgttcag
attcttgcaccgacttaccgtggtcaagtcggaatcgacgaattaaatgtcgccttgcaa
cgcgtctacaacccggaagaaccaaagaaacgagaagttaaacaaggcacgcggatttac
cggaccggagataagattctccagctcgtcaacaatgcagaagaaaacgtttataacgga
gatatcggagaaatcgtcaacatcttcttcgctaaagagaatgtcgacaaggtggataag
atcatcgcccgcttcgaccagacggaagtcgagtataaccgaagtgactgggatcaattc
acgcatgcctatgcgatcacgatccataaggcgcaagggtccgagtttccaatcgtcttg
atgccggtctattttacgggggcgttcaagcattcccgaaatttgatttatacggcggtt
acccgtgcgaagtcgagtttattattgttcggcgacccacgagcattccataaagcgtcg
caagaagaggaaccccggcgccgtacacgattgattgaacgactcggtggtgtgacaaag
acttga
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integrated database retrieval system
