Exiguobacterium sp. U13-1: ESP131_15820
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Entry
ESP131_15820 CDS
T04561
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
exu
Exiguobacterium sp. U13-1
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
exu03009
]
ESP131_15820
Enzymes [BR:
exu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ESP131_15820
Ribosome biogenesis [BR:
exu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ESP131_15820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
PrmA
Methyltransf_11
RrnaAD
PCMT
Methyltransf_32
Methyltransf_12
UPF0020
Methyltransf_4
FtsJ
N6_N4_Mtase
TPMT
DUF6514
Methyltransf_23
Exog_C
Motif
Other DBs
NCBI-ProteinID:
AOT01665
LinkDB
All DBs
Position
complement(3062267..3063634)
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AA seq
455 aa
AA seq
DB search
MIPVQKNDEHVVEIVDLTHEGSGVARIDGYTVFIPGALPTEQVKIKITKTTKSYGFGRII
RQKTKSVDRVEPPCPVYNQCGGCQLQHLSYDAELKFKHNRVRDAFARLAGLEIPVHETIG
MEDPWGYRNKAQVPVAFQSNKLMAGFYQKRSHRIIDMDYCLIQNKENDEAVQTVRKVLAD
LKVPAYDEKKKAGVIRHIMARHGYHTNELMVVLVTKVKQLRGIDKIVEGILKALPNVTSI
QHNINPDDTNVILGKKNVVLYGPSVIRDQIAGLTYEISPHSFFQVNPLQTEKLYAKALEY
AQLTGDETVVDAYCGIGSISLSLAQQAKHVYGIEIVPQAIDDARRNAQANGIENVTFEYG
AAEKVMPALVKAGIQPDVIVVDPPRKGCDEEFLRAAADVAPKRIVYVSCNASTQARDAKL
LTELGYTLVEVTPVDMFPHTTHVESVALFEIVNKS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaaaagaacgatgaacacgtcgtcgaaatcgtcgacctgacacatgaa
gggtcgggggtcgcgcgtatcgatgggtacacggtcttcatcccaggcgcattgccgacg
gagcaggtcaagatcaaaatcacgaaaacgacgaagtcttacggattcggtcgcatcatc
cgtcaaaagacgaagagtgtcgatcgtgtcgagccaccttgtccggtttacaaccagtgt
ggcggttgccaattgcaacatttatcatacgacgcagaactcaagttcaagcacaaccgt
gtccgtgacgcgttcgcgcgcctggcaggtcttgaaattccagtccatgagacgatcgga
atggaagatccgtggggttaccgcaacaaagcacaagtaccggttgcattccaatcgaac
aaattgatggctggcttctaccaaaaacggagtcaccggatcatcgatatggactactgc
ttgattcagaacaaagaaaacgacgaagctgttcaaacggttcgtaaagtccttgctgat
ttaaaagtaccagcatacgacgagaagaaaaaagcaggtgtcatccgtcatatcatggca
cgtcatggctaccatacgaacgagttgatggtcgttctcgtcacaaaggtcaaacaactt
cgcggtatcgataagattgtcgaagggattttaaaggcgttaccgaacgtcacatcaatc
cagcacaacatcaacccagatgatacgaacgtcattcttgggaaaaagaacgtcgtcttg
tacggaccgtctgtcatccgcgatcaaattgctggtttgacgtatgagatctcaccgcat
tcgttcttccaagtcaacccgcttcaaacggagaaactctacgcgaaagcgctcgagtat
gctcagttaacaggagatgagaccgtcgttgatgcttactgtggcatcggctcgatttca
ttgtcactcgcacaacaagcgaagcacgtctacggcatcgaaatcgtaccgcaagcgatc
gatgacgcacgtcgtaacgcccaagcgaatggtatcgagaacgtgacgttcgagtacggt
gcagccgagaaggtcatgccggcactcgtcaaagccggtattcaaccggacgtcatcgtc
gtcgacccaccacgtaaagggtgtgacgaagagttcttgcgtgctgcagcagatgtcgca
ccgaagcggatcgtctacgtctcatgtaatgcgtcgacacaagcgcgtgacgcgaagttg
ttaacagaactcggttatacactcgttgaagtgacgccagtcgatatgttcccacatacg
acacacgtcgagagcgttgccttgtttgaaatagttaacaaatcctaa
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