Eggerthella sp. YY7918: EGYY_20260
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Entry
EGYY_20260 CDS
T01566
Symbol
DapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eyy
Eggerthella sp. YY7918
Pathway
eyy00300
Lysine biosynthesis
eyy00470
D-Amino acid metabolism
eyy01100
Metabolic pathways
eyy01110
Biosynthesis of secondary metabolites
eyy01120
Microbial metabolism in diverse environments
eyy01230
Biosynthesis of amino acids
Module
eyy_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eyy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EGYY_20260 (DapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EGYY_20260 (DapF)
Enzymes [BR:
eyy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
EGYY_20260 (DapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF3335
Motif
Other DBs
NCBI-ProteinID:
BAK45116
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Position
2171326..2172117
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AA seq
263 aa
AA seq
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MHFTKMHGLGNDYLYVYGEVPEDIKELSTRLSDRHFGAGADGMIYITNSAVADFKMRIFN
ADGSEAAMCGNGIRCVGKYVYDKGYTDKTRLSIETLSGIRTLQLHVVAGTVRSVTVDMGM
VVTEPPVTVSVGEDQITLTPVSVGNPHAVVFVGDVEAVPLATLGAALEHHELFPDGVNVE
FVQVLDNEALRMRVWERGSGITLACGTGACASVGAAIAANHCQYSDVVAVQLDGGTLKIE
ISPDNVAHMGGPAHFVYEGETLS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcactttacgaaaatgcacggcttgggaaacgattacttatatgtatacggagaagtc
cccgaagacattaaagagctttcaaccaggctttctgatagacatttcggcgccggtgcc
gacggcatgatttacataactaattctgctgttgccgattttaaaatgcgcatcttcaac
gcggacggcagcgaggctgccatgtgcggcaacggcatccgctgtgtcggaaagtacgtc
tacgacaagggttacaccgataagacgcgcctttccattgaaacactctcgggtatccgc
acgcttcaacttcatgtggtagccggaaccgtaagaagcgtgacggttgatatgggaatg
gttgtgacagaaccgcccgtgacggtatcagttggcgaagatcagattactctcacgcct
gtttccgttggcaatcctcacgcagttgtgtttgtgggcgatgttgaagcggtgccactc
gcaacattaggtgctgcgcttgaacaccatgagcttttccccgatggcgtgaacgttgaa
tttgtgcaggtgctcgacaacgaggctttgcggatgcgtgtatgggaacgcggcagcggc
atcactttggcatgcggcaccggggcatgcgccagcgtaggcgctgccatagctgcgaat
cactgccaatatagcgatgtagtcgcagttcagctggatggcggtaccttaaaaatagaa
atcagtcccgacaacgttgcccacatgggcggccctgcccacttcgtctacgaaggagaa
accctctcatga
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