Epilithonimonas zeae: KI430_07105
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Entry
KI430_07105 CDS
T08226
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eze
Epilithonimonas zeae
Brite
KEGG Orthology (KO) [BR:
eze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eze03032
]
KI430_07105
03400 DNA repair and recombination proteins [BR:
eze03400
]
KI430_07105
Enzymes [BR:
eze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KI430_07105
DNA replication proteins [BR:
eze03032
]
Prokaryotic type
DNA Topoisomerases
KI430_07105
DNA repair and recombination proteins [BR:
eze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KI430_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
YebG
ADAMTS_spacer1
Motif
Other DBs
NCBI-ProteinID:
UQB70188
LinkDB
All DBs
Position
1604923..1605909
Genome browser
AA seq
328 aa
AA seq
DB search
MKVTRQATGKNFSYFDKNKEKLKDPQKIEYIKSLVIPPAWTNVEITTNKSAKILAIGRDQ
KGRKQYIYNPKFRAKKDADKFDRILHFAENLEHMRRVTGQHLRKKKMTREKVLAAMVRLL
DSAYFRPGSPKYTQQNQSYGLTTIRKKHLNIEGDEMIFSYKGKSGKFQEKHIINAKLTKV
ISDLEDLPGYRLFKYYDKDNNLITVESQDLNQYIKEIMGEEFSAKDFRTWAGTMIAAGIL
DELGICEKKQQKELKKRIRNAIVAVSEKLGNTPSVARDSYIDPRIFEHYKNGHTIQYFKK
EIKKLLRKNENLSETEVGVLYMLKSKLS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacacgccaagctacaggaaaaaatttttcttatttcgataaaaataaagag
aaactcaaggacccacaaaaaatcgaatatataaaatcgttggtcattccaccagcttgg
accaatgttgaaatcacaaccaataaaagcgcaaaaatactggcaatcggacgagaccaa
aaaggcagaaagcaatacatctacaatccaaaattccgagctaagaaagatgcggacaag
tttgacaggattttacattttgccgaaaacctggaacatatgcggcgcgttacaggacaa
catctgagaaagaaaaaaatgacccgtgaaaaagttcttgccgcaatggtcagactttta
gattctgcttattttcgtcctggaagtccaaaatatacacaacaaaaccagagttatggc
ttaacaaccatccgcaaaaaacatcttaacattgaaggcgacgaaatgattttttcttac
aaaggaaaatcaggaaaatttcaagaaaaacatattatcaatgctaaattgacaaaagtc
atttctgatttggaagatctcccaggctacagacttttcaaatattatgataaagacaac
aatcttattacggttgaaagtcaggatctgaaccaatatatcaaagaaataatgggtgag
gaattttctgcaaaagatttcagaacctgggcaggaacgatgattgctgccggaattctg
gatgaattgggaatctgtgaaaaaaaacaacaaaaagaattgaaaaaaagaatccgaaat
gcgattgttgcagtttctgaaaagttaggcaatacaccttccgtagcaagagattcttac
attgatccccgcatttttgaacattacaaaaacggacacaccatacaatatttcaagaaa
gaaattaaaaagctattgagaaagaatgaaaatctgtccgagaccgaagttggtgttttg
tatatgttgaaatcgaaattaagttaa
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integrated database retrieval system
