Epilithonimonas zeae: KI430_11295
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Entry
KI430_11295 CDS
T08226
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eze
Epilithonimonas zeae
Brite
KEGG Orthology (KO) [BR:
eze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eze03032
]
KI430_11295 (topA)
03400 DNA repair and recombination proteins [BR:
eze03400
]
KI430_11295 (topA)
Enzymes [BR:
eze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KI430_11295 (topA)
DNA replication proteins [BR:
eze03032
]
Prokaryotic type
DNA Topoisomerases
KI430_11295 (topA)
DNA repair and recombination proteins [BR:
eze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KI430_11295 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
VWA_3
Motif
Other DBs
NCBI-ProteinID:
UQB67620
LinkDB
All DBs
Position
complement(2513239..2515797)
Genome browser
AA seq
852 aa
AA seq
DB search
MPKNLVIVESPAKAKTIQKYLGSDFEVKSSFGHIRDLPKKGMGIDLSNFTPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IDNPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKTGLSAGRVQSVAVRLVVEREME
IRSFVPKPSFKVEGTFLNNAKQEIAAKLKKDFEKESEAEKFLELAKTTDFNVLNVETKPG
SRTASAPFTTSTLQQEASSRLGYGVTTTMRLAQRLYEEGFITYMRTDSVNLSQEAINGAK
AQIISEYGENYSKPRNYTTKSSSAQEAHEAIRPTDFSVKSIGDVQLNKLYQLIYRRTLAS
QMENAKIEKTVIEIGNSKLSQHFEAQGEVIVFDGFLKAYGIVKTEDDDDESNEKLLPKVA
IGEALDYKKITATEKFTRPSARFTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREIVKMTLGKTGVKKEVIDEKFGGDKNKFVPTDIGEVVNDFLINNFAEILDYGFT
ARVEEGFDEIANGDQKWKEMMTDFYSKFHPRIEDVEENADRANGERILGVDPKTGKNVHA
RIGRFGPMIQIGEQDDEEKPTFASLMSNQNIATITLEEALELFKLPFDLKEIDGQPVSVG
VGRFGPYVKWGETYISVPKGEDPLSIDQNRAEEIINEKKVADAPIANYKGEPVTKGTGRF
GPFIKYQSIFINVPKRYNFDNLSQNDINELIDAKLEKEANRYIQHWEAEKISIENARWGP
IVKYGKNIYKIPKKKDDSKYEADELKDVSLDEVKKWITAQDPKAFAEKKKPAAKKATTAK
KPATKKATAKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatttagtgatcgtcgagtctccggcaaaagcaaaaacaattcagaaatat
ttaggctcagatttcgaggttaagtccagcttcgggcacatccgtgatctgcctaaaaaa
gggatgggaatcgatctttcgaatttcacaccggactatgaagtgtctgctgataagaag
aaactggtgacggaactaaaagctgctgttaaaaaagcagaaatggtttggttggcttcc
gatgaggaccgcgagggagaagctattgcctggcatttggcagatgagctaaaactgaag
cctgaaaatagaaaaagaattgttttccacgagattaccaaaaatgcgattttaaaagcc
attgataatccaagagatatcgaccaaaatttggttaacgcacaacaagcgagaagagtt
ttggacagaattgtaggttttgagatgtcgccggtgctttggaaaaaagtaaaaacgggt
ttgtctgccggtagagttcagtctgttgcagtaagattggtggtagaaagagaaatggaa
atcagaagttttgttccaaagccaagtttcaaagtggaaggaactttcctgaataatgca
aaacaggagatcgccgctaaactgaaaaaagattttgagaaagaatctgaggcagaaaaa
ttcttggaattagcaaaaacaacagatttcaatgttctgaatgttgagaccaaacctgga
tctcgtacagcatctgctccgtttacaacatctacgttacaacaggaagcttcttccaga
ttgggttatggtgtgacaacaacgatgcgtctggcacaaaggctttacgaagaaggattc
atcacatatatgagaacggattccgtaaatctttctcaggaagctatcaatggagcaaag
gcacaaattatttcagaatacggcgaaaattattctaaaccgagaaattataccacaaaa
tcatcgtctgcacaagaagcgcacgaagcgattcgcccgacagacttttctgtgaaatcc
attggtgatgtgcaattgaataaattgtatcagttgatttacagaagaactttggcttcc
caaatggagaatgctaaaatcgagaaaacggttatcgaaattgggaattcaaaattgtcg
caacacttcgaagcgcaaggtgaagttatcgttttcgatggtttcttaaaagcttacggc
attgtgaaaactgaagatgatgatgacgaaagcaacgaaaaattgttaccgaaagtagca
attggcgaagctttagactataaaaaaataacagcaacagaaaaattcacaagaccatca
gctagatttaccgaagctggtttggttaaaaaactggaagaattgggaatcggtcgtcca
tcgacttacgcaccgacaattcaaaccattcagaatcgtgaatacgttgataaaagagaa
atagaaccacaaacgagagaaatcgtaaaaatgactttaggcaaaaccggagttaaaaaa
gaagttattgatgaaaagtttggtggtgataaaaataaattcgttcctacggatattggg
gaggtggtgaatgatttcctaatcaacaattttgctgagattctggattatggtttcacg
gccagagtggaagaaggctttgatgagattgccaacggtgaccagaagtggaaggaaatg
atgacggatttctattcgaaattccatccaaggattgaagatgttgaggaaaatgcagac
cgtgcgaatggcgaaagaatcttaggcgttgatcctaaaaccggtaaaaacgtacacgca
agaatcggaagatttggaccaatgattcagataggcgagcaggacgatgaggagaaacca
acgtttgcttcattgatgtccaatcaaaatattgcgaccatcacactggaggaagcttta
gagttgttcaagttacctttcgatttgaaagaaattgatggtcaacccgtttctgtgggt
gttggaagatttggaccttatgtgaaatggggcgagacttacatcagtgttccgaaaggt
gaagatccattatctattgaccaaaatagagcagaggaaatcatcaatgaaaagaaagtg
gcagatgcaccaattgctaactacaaaggtgagcctgtaaccaaaggaacgggaagattt
ggaccttttatcaaatatcaaagtattttcatcaacgttccgaaacgttataacttcgat
aatctttctcaaaacgatatcaatgaattgattgatgccaaactggagaaagaagccaac
cgatacatccagcattgggaagcagaaaaaatttctatcgaaaatgcgagatggggaccg
attgtaaaatacggcaagaatatctataaaatccctaaaaagaaagatgattctaagtat
gaagcagacgaactgaaagatgtttcattagatgaggtgaaaaaatggatcacagcacaa
gacccgaaagcctttgctgagaaaaagaaaccggcggctaagaaagcaactactgctaaa
aagcctgctacgaagaaagcgacggcgaagaagaagtaa
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