Filifactor alocis: HMPREF0389_00098
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Entry
HMPREF0389_00098 CDS
T01663
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
faa
Filifactor alocis
Pathway
faa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0389_00098 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_00098 (ung)
Enzymes [BR:
faa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF0389_00098 (ung)
DNA repair and recombination proteins [BR:
faa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0389_00098 (ung)
Prokaryotic type
HMPREF0389_00098 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EFE28184
UniProt:
D6GR93
LinkDB
All DBs
Position
complement(608190..608864)
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AA seq
224 aa
AA seq
DB search
MVNFGNKWDSLLKEEFQEEYYQKLRTFLITEYRTKTIYPDMYHIFEAMKATDYDDVKVVI
LGQDPYHEPNQAHGMAFSVQPGVRIPPSLFNIYKELSSQLGLTIPNHGYLMKWAKQGVLL
LNAVLTVERGKANSHKNMGWEQFTDRVIQLVNAKEKPVVFLLWGSNAIAKAKMIDTKKHL
VLTSPHPSPLSAYRGFFGNGHFLTTNEFLKQKYSQVIDWQIDDI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttggttaatttcggaaataagtgggactctctgttgaaagaggagtttcaagaagagtat
tatcaaaagttgagaacatttttaataacagagtatagaacgaagacgatttatccggat
atgtatcatattttcgaggcgatgaaagcaactgattatgatgatgtgaaggtggttatt
ttgggacaggacccataccatgagccaaatcaggcacatggtatggcattttctgtgcaa
ccgggagttcgcattccaccgtcactgttcaatatttataaggaactttccagtcagttg
ggacttaccataccgaatcatggttatctgatgaagtgggcaaaacaaggagtacttctc
ttaaatgcggtgcttactgtggagcgtggaaaagcaaattcacataaaaacatgggatgg
gaacaatttactgacagagtgattcagttagtgaatgcaaaagaaaagccggtcgttttt
ttgctttggggttcgaatgcgattgcaaaagcaaagatgattgatacaaagaaacatctg
gtattaacttcacctcacccgagtccgctttctgcatatcgcggtttttttggaaatgga
catttcctcacaacgaatgaatttttgaaacaaaaatatagtcaagtgattgactggcaa
atagatgatatataa
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