KEGG   Filifactor alocis: HMPREF0389_00210
Entry
HMPREF0389_00210  CDS       T01663                                 
Symbol
csn1
Name
(GenBank) CRISPR-associated protein, Csn1 family
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
faa  Filifactor alocis
Brite
KEGG Orthology (KO) [BR:faa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:faa02048]
    HMPREF0389_00210 (csn1)
Prokaryotic defense system [BR:faa02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    HMPREF0389_00210 (csn1)
SSDB
Motif
Pfam: Cas9_REC Cas9_PI HNH_4 Cas9-BH Cas9_RuvC USHBP1_PDZ-bd HNH RRXRR
Other DBs
NCBI-ProteinID: EFE28295
UniProt: D6GRK4
LinkDB
Position
complement(475812..479909)
AA seq 1365 aa
MTKEYYLGLDVGTNSVGWAVTDSQYNLCKFKKKDMWGIRLFESANTAKDRRLQRGNRRRL
ERKKQRIDLLQEIFSPEICKIDPTFFIRLNESRLHLEDKSNDFKYPLFIEKDYSDIEYYK
EFPTIFHLRKHLIESEEKQDIRLIYLALHNIIKTRGHFLIDGDLQSAKQLRPILDTFLLS
LQEEQNLSVSLSENQKDEYEEILKNRSIAKSEKVKKLKNLFEISDELEKEEKKAQSAVIE
NFCKFIVGNKGDVCKFLRVSKEELEIDSFSFSEGKYEDDIVKNLEEKVPEKVYLFEQMKA
MYDWNILVDILETEEYISFAKVKQYEKHKTNLRLLRDIILKYCTKDEYNRMFNDEKEAGS
YTAYVGKLKKNNKKYWIEKKRNPEEFYKSLGKLLDKIEPLKEDLEVLTMMIEECKNHTLL
PIQKNKDNGVIPHQVHEVELKKILENAKKYYSFLTETDKDGYSVVQKIESIFRFRIPYYV
GPLSTRHQEKGSNVWMVRKPGREDRIYPWNMEEIIDFEKSNENFITRMTNKCTYLIGEDV
LPKHSLLYSKYMVLNELNNVKVRGKKLPTSLKQKVFEDLFENKSKVTGKNLLEYLQIQDK
DIQIDDLSGFDKDFKTSLKSYLDFKKQIFGEEIEKESIQNMIEDIIKWITIYGNDKEMLK
RVIRANYSNQLTEEQMKKITGFQYSGWGNFSKMFLKGISGSDVSTGETFDIITAMWETDN
NLMQILSKKFTFMDNVEDFNSGKVGKIDKITYDSTVKEMFLSPENKRAVWQTIQVAEEIK
KVMGCEPKKIFIEMARGGEKVKKRTKSRKAQLLELYAACEEDCRELIKEIEDRDERDFNS
MKLFLYYTQFGKCMYSGDDIDINELIRGNSKWDRDHIYPQSKIKDDSIDNLVLVNKTYNA
KKSNELLSEDIQKKMHSFWLSLLNKKLITKSKYDRLTRKGDFTDEELSGFIARQLVETRQ
STKAIADIFKQIYSSEVVYVKSSLVSDFRKKPLNYLKSRRVNDYHHAKDAYLNIVVGNVY
NKKFTSNPIQWMKKNRDTNYSLNKVFEHDVVINGEVIWEKCTYHEDTNTYDGGTLDRIRK
IVERDNILYTEYAYCEKGELFNATIQNKNGNSTVSLKKGLDVKKYGGYFSANTSYFSLIE
FEDKKGDRARHIIGVPIYIANMLEHSPSAFLEYCEQKGYQNVRILVEKIKKNSLLIINGY
PLRIRGENEVDTSFKRAIQLKLDQKNYELVRNIEKFLEKYVEKKGNYPIDENRDHITHEK
MNQLYEVLLSKMKKFNKKGMADPSDRIEKSKPKFIKLEDLIDKINVINKMLNLLRCDNDT
KADLSLIELPKNAGSFVVKKNTIGKSKIILVNQSVTGLYENRREL
NT seq 4098 nt   +upstreamnt  +downstreamnt
ttgacaaaagaatattatttaggactggatgtaggcactaattctgtaggttgggcagtt
accgattcacaatacaacctatgcaaattcaagaaaaaagatatgtggggaattagatta
tttgaatcagcaaatacagcaaaagatagaagactacaaagaggaaacagaagaagactt
gagcgaaaaaaacaacgaatcgatttattacaagaaattttttctcctgaaatctgtaaa
attgatcctaccttctttataagattgaatgagagtaggttacatttggaagataagtcg
aatgattttaaatatccgttgttcatcgaaaaagactattctgatatagaatattacaaa
gaatttcctactatatttcatttacgaaagcatttgatagaatcagaggaaaaacaggac
atcaggctgatatatcttgcactacataatattattaaaacgagaggtcattttttaatt
gatggagatttgcaaagtgcaaaacaactcagacctatcttagatacctttttgttgagt
ttacaagaagaacaaaatctttctgtaagtttgtctgaaaatcagaaagatgaatatgaa
gaaatcttaaaaaatagatcgattgcaaaaagtgaaaaagtaaaaaaattaaagaattta
tttgaaataagtgatgagttagaaaaagaagaaaaaaaagctcaaagtgcagtaattgag
aatttttgtaaatttattgtcggtaacaagggagatgtttgcaaatttttgagagtaagt
aaagaagaattagagatagactccttttctttctcagagggaaagtatgaagacgatatt
gtaaagaatttagaagaaaaagttcctgaaaaagtatatctttttgaacaaatgaaggca
atgtatgattggaatattttggtagatattttagaaacagaggagtatatttcctttgct
aaggtaaaacagtatgagaagcataaaacgaatttgagattgctaagagatattatttta
aaatattgtacaaaagatgaatataatcgtatgtttaatgacgaaaaagaagcaggttcc
tacactgcgtatgtcgggaagttaaaaaagaacaataaaaagtattggattgagaaaaaa
agaaatccggaagagttttataaatctttaggaaaattgttagacaaaatagaaccatta
aaagaagatttagaagtccttactatgatgatagaagaatgtaagaatcacacactgctt
cctattcaaaaaaataaggataacggagttattccacatcaagttcatgaagtagaattg
aaaaaaatattggaaaatgccaaaaaatactattcttttttgacagaaacagataaagat
ggatattctgttgtgcaaaagatagagagtatatttagatttagaattccatactatgta
ggacctttgagtacaagacatcaagaaaaaggttctaatgtatggatggtaagaaaaccg
ggaagagaagatagaatctatccttggaatatggaagaaatcatagattttgaaaaatca
aatgaaaactttattacgagaatgacgaacaaatgtacctatctaataggagaagatgtt
cttccgaaacactctctactatattctaaatatatggttttgaatgaattgaataatgtg
aaagtaagaggaaaaaaattaccaacgtctttaaaacaaaaagtatttgaagatttattt
gaaaacaaatccaaagtaacgggaaaaaatttgttagagtatttacaaattcaggataaa
gacattcaaattgatgatttaagcggatttgacaaagatttcaagacttctttaaaatca
tatttggattttaaaaaacaaatttttggagaagaaatagaaaaagaatccattcaaaat
atgatagaggatattattaaatggattacaatctatggaaatgataaagaaatgttgaag
agagtcattcgggctaattattcgaatcaattgaccgaagaacagatgaaaaaaataaca
gggtttcaatattccggatggggaaacttctcgaaaatgtttttgaaaggaatatcagga
agtgatgtttcaacaggcgaaacatttgatattattactgcgatgtgggaaacagataat
aacttaatgcagattttaagcaaaaaatttacgtttatggacaatgttgaagactttaat
agtggtaaagtaggaaaaatagataagattacttatgattctacggtaaaagaaatgttt
ctgtcaccggagaataagagagcagtttggcaaacaattcaagttgccgaagaaatcaaa
aaagtaatgggttgtgaaccgaaaaaaatttttattgaaatggctcgtggtggcgagaag
gtgaagaagagaacaaaatccagaaaagctcaattgttagaactttatgctgcttgtgaa
gaagattgtagagaacttataaaagagattgaagatagagatgaaagagattttaacagt
atgaaattatttttatactatactcaatttggaaagtgtatgtatagtggtgatgatatt
gatatcaatgaattaattagaggaaattcaaagtgggatcgggatcatatttatcctcaa
tccaagataaaagacgatagtattgataacttagtgttggttaataaaacatataacgca
aaaaaatcgaatgaattattgtctgaagatattcaaaagaagatgcacagtttttggctc
tctttattaaataaaaaattaattaccaagtcaaagtatgatagattgactcgaaaaggc
gattttacagatgaggagttaagtggttttattgcaagacagttggtagaaacaagacag
tccaccaaagcaattgcagatatattcaagcagatctattcttcagaggtagtttatgtg
aaatcttctttggtgtcagattttcgaaaaaaaccgttaaattatttgaagtccagaaga
gtaaacgattatcatcatgcgaaggatgcatacttgaatattgttgttggaaatgtatac
aacaaaaaatttacatctaatccgattcagtggatgaaaaagaatagggatactaactac
agtttaaataaagtgttcgagcatgatgtcgttataaatggagaagtgatttgggaaaaa
tgcacgtatcatgaggacacaaatacctatgatggaggaacattagacagaataagaaag
attgtagaacgtgacaatatcttgtatacagaatatgcttactgtgaaaaaggagagtta
tttaatgcaacaatacaaaacaaaaatggaaattcgaccgtttcattaaagaaaggtttg
gatgtaaaaaaatatggaggatatttcagtgcaaacacttcctatttttcattgattgaa
tttgaggataagaaaggagatagggcaagacatatcatcggggtgcctatctatattgca
aatatgttagagcattctccttctgcatttttggagtactgtgaacagaagggatatcaa
aatgtcagaatattggttgaaaaaattaaaaagaattctcttttgattatcaacggatat
ccattgagaatcagaggagaaaatgaggtagatacttcatttaaaagagcgatacaacta
aaattggatcaaaaaaattatgaattggtacgaaatattgaaaaattccttgaaaagtat
gttgaaaagaagggcaattatccgattgatgagaacagggatcatattactcatgaaaaa
atgaatcaactctatgaagtattgttatccaaaatgaaaaaatttaataaaaaaggaatg
gcagatccgtctgataggatagaaaagtccaaaccgaaatttataaaattggaagacctg
attgataaaataaacgtaattaataagatgttaaatttattaagatgcgataatgatact
aaagcagatttatccctaatagaattacctaaaaatgcaggtagttttgtagtcaaaaaa
aatacgattggaaagagcaagattattttggtgaatcaatcggttacaggattatatgaa
aataggagagagctatga

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