Filifactor alocis: HMPREF0389_00331
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Entry
HMPREF0389_00331 CDS
T01663
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
faa03016
]
HMPREF0389_00331 (truB)
Enzymes [BR:
faa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0389_00331 (truB)
Transfer RNA biogenesis [BR:
faa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0389_00331 (truB)
Prokaryotic type
HMPREF0389_00331 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
EFE28416
UniProt:
D6GRX5
LinkDB
All DBs
Position
complement(346742..347638)
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AA seq
298 aa
AA seq
DB search
MMDGFINILKPTGMTSHDVVSIVRRLLRQKKVGHTGTLDPNAAGVLPICIGRATKFSDFV
LKDKKRYYAKVNLGLQTDTLDSYGMVTDRRKVVPFQKEQLLQAIQKFIGEISQIPPKYSA
IKVNGKRLYELARLGQELSEIEIKERNIFIHSINLLECDVDSFSLDIICSSGTYIRSLAV
DIAAEIGNIGYLSLLIRTESGNFYIQDSITLEELEGQTESLDQNNIIIPIENILLHYPEY
TLDDLLSKIYLNGGTVFLNNFDLTTGIYRIYSKEDMLLGIGTIFESNSKKYLKNIKFV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggcttcattaatattttaaaaccaaccgggatgacgtcgcatgatgttgtg
tcaattgtaagaagattgcttcgccaaaaaaaagtaggtcataccggtacgttagatcca
aatgctgccggagttcttcctatatgcatagggagagcaactaaatttagtgattttgta
ttaaaggataaaaagaggtattatgctaaagttaatttgggcttacaaacagatacactg
gattcttatggaatggtaacagatagaagaaaggttgttcccttccaaaaagaacagttg
ctacaagcaatccagaaatttattggagaaatttctcagattcctcctaaatacagtgca
ataaaagtgaatgggaagagactatatgaattagcaagattgggacaggaactttctgaa
attgaaataaaggaaaggaatatttttattcattccattaatttgttagaatgtgatgtg
gattccttttcgcttgatatcatctgttcctcaggaacatatataagaagtttagcggta
gatattgctgcagaaataggaaatataggatacttatcattattaattcgtacagaaagt
ggaaatttttatatccaggatagtataacactggaagaattagaaggacagacggagagt
ttagatcaaaataatatcataatccccatagaaaatatattattgcattatccagaatat
acattagacgacttgcttagtaagatttatcttaatggtggaacagtttttttaaataat
tttgatttaacaacaggaatttatcgtatatattcaaaagaagatatgctcttgggaatt
ggaactatatttgaaagtaatagtaaaaagtatttaaaaaatattaagtttgtatag
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