Filifactor alocis: HMPREF0389_00369
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Entry
HMPREF0389_00369 CDS
T01663
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
faa03019
]
HMPREF0389_00369
03009 Ribosome biogenesis [BR:
faa03009
]
HMPREF0389_00369
Messenger RNA biogenesis [BR:
faa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0389_00369
Ribosome biogenesis [BR:
faa03009
]
Prokaryotic type
rRNA processing factors
HMPREF0389_00369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
ER
Motif
Other DBs
NCBI-ProteinID:
EFE28454
UniProt:
D6GS13
LinkDB
All DBs
Position
complement(308669..310021)
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AA seq
450 aa
AA seq
DB search
MKKKLIIEDSSFLTKVAYLNQGTVERIEIIKKDYHIKKNQIYQCRVKKNIVSSSGKLVDL
GNQELGFLQVNKDLKNGDVVIAQIKKEPISSKLAKLTDDINLSGEYVIYLPYGKEIFLSN
KIKNDTRSDKLVKKLSTDFLNIGLIVRTEAIEVDYEQVRDEVERLVDLFNEIMKKKKEGV
IGLLYEQDSLSDFFHHFRFDTIDEIISNSQEIISKVKDWARSKKMRPEYIFQEIDLFGSC
GISLTKLFSKKYEFGNISIIIEPTEAFTAVDVNSGYQERHCYMDDMALEVNLKSCKYVVD
LIIKKNISGIILIDFIDMKKHGYQEKLLRRLREEFRRDIKKVSVLNITSLGIVQVIRQRE
KENIMDMISFSCPLCSGSGYLKSPLILLDELEVELRKYLYHRELKKGNILVLAPGYMKSY
FDKNQSFLESKYGVSMNIKYEDYMNGVKLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaattaattatcgaagatagttctttcttaacgaaggtagcatatttgaat
caaggtactgttgaaagaattgagattataaagaaagactatcatattaaaaaaaatcaa
atttatcaatgtagagtaaaaaaaaatattgtatcttccagcggtaagctggtagattta
ggaaatcaagaattgggttttttgcaagttaataaagatttaaaaaatggggatgtggta
atagcacaaataaagaaggagcctatttccagcaaacttgcaaagctaaccgatgatatt
aatctatcaggagagtatgtaatatatcttccgtatggaaaagagatatttctatcgaat
aaaataaaaaatgatactcgttccgacaaactagtgaagaagcttagtacggactttttg
aacataggtttaattgtacgaactgaggctattgaggtggattatgaacaggtaagggac
gaagtagagcgcttagtagacctttttaatgaaataatgaaaaaaaagaaagaaggagtg
attggattactttatgaacaagattctttgtcagatttttttcatcactttcgatttgat
acaatagatgaaattatttcaaatagccaagaaattatttcaaaagtcaaagattgggct
cgttcaaaaaagatgcgtcctgaatatatatttcaggaaatagacctatttggcagttgt
ggaatttcgctaacaaaattattttctaaaaaatatgagtttggaaatattagtattatc
atagaacctacagaagcatttacagcggtggatgtcaatagtggatatcaggaaagacat
tgttatatggatgatatggctttggaagtgaatcttaagtcgtgtaaatatgtagtagat
ttaattatcaaaaaaaatatttcaggaattattttaattgattttattgatatgaaaaaa
catggatatcaagaaaaacttttgcgtcgattgagagaagagtttagaagagatatcaaa
aaagttagcgtgctgaatattacttccctaggaattgttcaagtgattagacaacgagaa
aaagaaaatattatggatatgatttctttttcttgtcctttgtgctcaggaagtgggtat
ttgaaatctccacttattttattggatgaattggaagtagaattaagaaagtatttgtat
catagagaattaaaaaaaggaaatattttagttttagcgcctggttatatgaaaagttat
tttgataaaaatcaatcttttttggaatctaaatatggtgttagtatgaatattaaatat
gaagattatatgaatggagtcaaattattgtag
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