Filifactor alocis: HMPREF0389_00394
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Entry
HMPREF0389_00394 CDS
T01663
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faa03009
]
HMPREF0389_00394
Enzymes [BR:
faa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HMPREF0389_00394
Ribosome biogenesis [BR:
faa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF0389_00394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
EFE28479
UniProt:
D6GS38
LinkDB
All DBs
Position
278997..279878
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AA seq
293 aa
AA seq
DB search
MRLDQFISSNLPSISRSYIQKLIDEKRVLVNGKYEKKSFLLKSFDNIEIYIPEPKSIEIS
PENIPLNILFEDKDILIVNKEKGMVVHPAPGNYSHTLVNAILYHCKGNLSEINGYIRPGI
VHRIDKDTSGILVIAKNNDAHQFLSEQFKEHSIQREYQLITFGNIKTTHLSIEQPIGRNP
KNRLQMAVVPNGKPAITHLTVIENFKDKTYLKARLETGRTHQIRVHCTYIGHPLLGDSLY
TNRKCEYQLQGQTLHAGYLGFVHPTSKKFIEFYSPLPEYFSHILRNETLKLQK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggatcaatttatttcttcaaatcttccaagtatatctcgttcttatatccaa
aagttgattgacgaaaaacgagtacttgtgaatggaaaatacgaaaaaaaaagttttttg
ctaaaatcttttgacaatattgaaatttacatccctgagcctaaaagtatcgaaatttct
cctgaaaatattccgctgaatattttatttgaagataaagatattttgattgtaaataaa
gaaaaaggaatggttgttcatcctgcaccgggaaattattctcacacgttagtgaacgcc
attttatatcattgcaaaggtaatctttctgaaatcaacggatatattcgacctggtatt
gttcatcggattgataaagatacatccggaatattagtgattgcaaaaaataatgatgct
catcaatttctttctgaacaatttaaggaacattctattcaaagagaatatcaattaatt
actttcggaaatattaaaacaactcatttatctatcgaacaaccgattggacgaaaccca
aaaaacagacttcaaatggctgtagttcctaacggaaaacctgccattacacatttaact
gtcattgaaaattttaaagataaaacatatttaaaagcaagattggaaaccggtagaact
catcaaatcagagtacattgtacttatataggccatcctttactcggtgattctttatac
actaatagaaagtgtgaatatcaattgcaaggtcagacattacatgcaggatatttaggt
tttgttcatccgacgagcaagaaatttatagaattttattcgcctttgcccgaatatttt
tctcacattttacgaaatgaaacattaaaacttcaaaagtaa
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