Filifactor alocis: HMPREF0389_00401
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Entry
HMPREF0389_00401 CDS
T01663
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faa03032
]
HMPREF0389_00401
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_00401
Enzymes [BR:
faa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0389_00401
DNA replication proteins [BR:
faa03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0389_00401
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0389_00401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
EFE28486
UniProt:
D6GS45
LinkDB
All DBs
Position
271654..273855
Genome browser
AA seq
733 aa
AA seq
DB search
MKQKTKKNSTQKYIETNKRTENIVDTLKQNYMPYAMSVIVSRAIPEIDGFKPSHRKLLYT
MYRMNLLNANRTKSANIVGQTMKLNPHGDSAIYETMVKLSRGNESLLHPYIDSKGNFGKS
TSRDMQFAAPRYTEAKLMPLCKELFGEIEKNTVDFVDNYDSTMKEPVLLPTTFPNILLKA
NKGIAVGMASSIPSFNLSEICNYTIAYLKDINCNMFDFILGPDFPSGGELLFDEEEMKSI
YETGRGSFKLRGKYRYLKKEQLIEIYEIPYTTTVEVIIEKIIDLIKDGTLREITDIRDET
DLNGLKITIDVRKNADVESMMGKIFKYTTLEDSFSCNFNVLIDNKPKILGIKDIIFHWLN
FRRQCIVRRTLNEMEDKSKRLFLLQGLEKIILDIDKAIAIIRNTEKEIDVLPNLMNAFAI
EEKQAEYILEIKLRNLNKEYILKKISEIKELEEEITKLEEIYHSQKLQDKLIISELKKII
KTYGQERKTTIVSKKDVVVYSKENFTEDYAVTMFLTKDGYLKKIPELSLRAYSEQKLKDN
DSILQQIEMNNTDVFMLLSTNNVLYQVKVSDLKDTKASLLGLFLPNYLKMEENERIIQMI
FPEEYEGYMVYFFENGKVAKINFSSYQTKSFRKKLQNVYSTQSPLVDCFHIKKDETFVIF
TDNYRCLSIDTSSIPEKISRSSQGVKVINLNKNAKVERIELLESDDREWDFCKTKTIPSS
AKKNKRLTTISFL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaaacaaaaaaaaattctacacagaaatatattgaaacgaataaaagaaca
gaaaatatagtggacacattaaaacaaaattacatgccatatgctatgagtgttatcgta
tctcgtgccattcctgaaattgacggatttaagccatctcatagaaagttgctctacaca
atgtatcgtatgaatctactaaatgccaatagaacaaaatctgctaatattgtcggacaa
actatgaaacttaatccacatggagattctgcaatttatgagacaatggttaaattatcg
cgcggaaacgaatctttattacatccctatattgattcaaaaggaaattttggaaaatcc
acatccagagatatgcagtttgcagctcccagatatactgaagcaaagctaatgcctctt
tgtaaagaactttttggtgaaatagaaaaaaataccgtagattttgtagataattatgat
tctactatgaaggagccggtattgttacctactacttttccgaatattttgctaaaagcc
aacaaaggaatcgctgtaggaatggcaagttccattccaagtttcaatctatcagaaata
tgtaactatactatcgcatatcttaaagatataaattgtaacatgtttgattttatttta
ggtcctgattttccatccggaggagagttgttgtttgatgaagaagaaatgaaatctatt
tacgaaacgggtcgtggaagtttcaaattaagaggaaaatatcgttatttaaaaaaagaa
caacttatcgaaatttatgaaataccatatactactaccgtagaagtcatcattgaaaaa
ataatagacctaatcaaagacggtactttaagagaaattacggatattcgtgatgaaacg
gatttaaatgggcttaaaattacgatagatgttcgaaagaatgcagatgttgaatccatg
atggggaaaatatttaaatacaccactttggaagattcatttagttgtaattttaatgtt
ttgatagataacaaacctaaaatattaggaatcaaagacattatttttcattggctgaat
tttagaagacaatgtattgtaagaagaacattaaacgaaatggaagacaagagtaaaagg
ttatttttgttacaaggattagaaaaaatcatcttggatattgataaggcaattgctatt
attagaaacacagaaaaggagattgacgtccttccgaatttaatgaatgcctttgcaatt
gaggaaaagcaagctgaatatatccttgaaataaaacttagaaacttaaataaggaatat
atcttaaaaaaaatcagcgaaattaaggagttggaagaagaaattacgaaattagaagaa
atatatcattcccaaaaattacaagataagctgattatttctgagttaaaaaagattata
aaaacttacggtcaagaaagaaaaacgaccatagtatcaaaaaaagatgttgtcgtatat
tcaaaagaaaattttacagaagattatgctgtaacgatgtttttaacgaaagacggttat
ctcaaaaaaatacccgaactctcccttagagcgtattctgaacaaaaattaaaagacaac
gactccattctacaacaaatagaaatgaacaatacagatgtttttatgctgttatctaca
aacaacgtactatatcaagtaaaagtaagcgatttaaaagacacgaaagcatctttactg
gggttatttctccctaattatttaaaaatggaagaaaatgaaagaataatacaaatgatt
tttcctgaagagtatgaaggatatatggtgtatttttttgaaaatggaaaagttgctaaa
attaacttttcttcttatcaaacaaaatcgttccgaaaaaaattacaaaatgtatattct
acacagagtccgttggttgactgcttccatatcaagaaagatgaaacatttgttattttt
acagataattatcgttgtctttctatcgacacttcatccattcctgaaaagattagcaga
agcagtcaaggagtaaaagtgattaatctaaataaaaatgcaaaagtagaaagaatagaa
ttattggaaagtgatgacagagaatgggatttttgtaagacaaaaacgattccgtcttct
gcaaagaaaaataagcgattgaccacaatttctttcttataa
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