Filifactor alocis: HMPREF0389_00555
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Entry
HMPREF0389_00555 CDS
T01663
Name
(GenBank) penicillin-binding protein, transpeptidase domain protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
faa
Filifactor alocis
Pathway
faa00550
Peptidoglycan biosynthesis
faa01100
Metabolic pathways
faa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0389_00555
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMPREF0389_00555
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
faa01011
]
HMPREF0389_00555
Enzymes [BR:
faa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HMPREF0389_00555
Peptidoglycan biosynthesis and degradation proteins [BR:
faa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HMPREF0389_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF5398
Motif
Other DBs
NCBI-ProteinID:
EFE28638
UniProt:
D6GSJ7
LinkDB
All DBs
Position
92764..95580
Genome browser
AA seq
938 aa
AA seq
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MKYNMQSRFYAFFVAVVVMFSLIFLKITYLTIFSGDLFSRREASFVYKKIEVKAPRGEIR
DRYGRLLAGNRPSFNVQLSRNNSLSQEEQNNAILKIISILKQNNEKIVDEFPIKIDANNY
YYFTYDEELRKWKEKNNIDPNASAKESFTLIANLLVEQGVIRIDKDTTSKEIQQKMIAAG
YYPPISIQQEMKFSHQVKKEEWIQKNFPKEYKQYLNKPAKEIFQLLREKNKISSSMDDRT
ARDMLNVLNILKMQSYQYQPVGISFDIKNNTVIQLEEASQDIPMVSVVVEPVRYYPHGNF
ASHILGYLGKISDNEIQEYVRDKKYNPSDIIGKTGIEKTFEEQLRGKAGYQEVQVDSRNR
MVGNLGFQNAEPGDTIYLTLDYKLQKTVEDTLKKTLGCIQNGSDYQSDWGNIRMRENKKV
FYKAQSGATIVMDVNTGKILAMASYPDYDPNKFVHGISQEDYELLMPKNLNDPMSPKPLF
NIATMMSVQPGSTFKMITGLAALENGLSPYYRIQDKGSIKIGNHSFGCWIWNSSGHSQTH
GMENLMDAIQDSCNYYFYCLSVGYDYSVDKPLPISMNSQKILDYATKFGLNEKTGIEIEE
TKGSVPTVGMEREKKVIALKNFLKEFLADKFEDIDSNSGEYITRINTIISWADENPSRGE
LIRRLREIKVKEKELNNVTDRIKYDYFISMGGWKEGDAFNLAIGQGAHSYTPLQLTRYVA
SIANKGNLNKVSLIDKRENYEKTDIIRHELETEVIQLKNNKNLEYLVQGMKNASDEGTSK
NTFNRFPIMVASKTGTAQRAGKIPTVDEKKYYLSHLSSYGVNYSDVMRVAEELEKNSKTK
LQDYQYIVQAILKLNKNLKKADLDQYKDSYDEFAWFVSFAPAEKPEIAVISVIVQGGHGG
YAAPMARDIYAQYFELTPYGTKPQETIQKKIQFLDELN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataatatgcagagtaggttttatgctttttttgttgcggttgtggtcatgttc
agtttgatttttttgaaaataacatatttgacaattttttccggagatttgtttagtaga
agagaggccagtttcgtttacaaaaaaattgaagtgaaagctccaagaggagagattaga
gatcgttatggacgcctgttggccggaaatagacccagctttaatgtacaattatccaga
aataacagcttgtctcaagaggagcaaaacaatgctatcctaaaaataatttctattttg
aaacaaaacaacgaaaaaattgtagatgaatttccaatcaagatagatgcaaacaactac
tactattttacttacgatgaagagcttcgaaagtggaaagaaaagaacaatattgatcca
aatgccagtgcaaaagaatcttttacactgattgcaaacttgttagtggagcagggagtt
atcaggatagataaggataccacatcaaaagaaattcaacagaagatgattgccgcggga
tattatcctcccatttctattcaacaagaaatgaaattttcacaccaagttaaaaaagaa
gagtggatacaaaaaaattttccgaaagaatataaacaatatctgaacaaaccggcaaaa
gaaatttttcagttactaagagaaaaaaataaaatttcgtcttccatggacgacagaaca
gcacgagatatgttgaatgtactcaatatcttgaaaatgcaaagttatcaatatcaaccg
gttggaatatcgtttgatattaaaaataatacagtcattcaattagaggaagcatcccaa
gatatcccgatggtatcggtcgtagtagaaccggtaaggtactatcctcacggaaatttt
gcttctcatattttgggatatctcggtaaaatatcagataatgaaatacaagagtatgta
agagataagaaatataatccttctgatatcattgggaagacaggaattgaaaaaacattt
gaggaacaacttcgcggcaaggcgggatatcaagaagttcaagtagattccaggaatcgt
atggttggaaatttagggtttcagaatgctgaacccggagatacgatctacctgacattg
gactacaagctccaaaaaacagtagaagatactctcaaaaaaacattgggttgtatccaa
aacggctccgattatcaaagtgattggggaaatatccgaatgcgagagaacaaaaaggtg
ttttataaggcacagtccggagcaacaattgtgatggatgtaaataccggaaaaatatta
gcaatggcaagttatccggattatgatcccaataaatttgtacacggaatttctcaggaa
gattatgagcttttgatgccgaaaaacttaaacgatccgatgtcacctaaaccgcttttc
aacattgcgacaatgatgtcagtgcaaccgggttccacatttaagatgattaccggtttg
gcagctttagaaaatggtttgagtccttattacagaattcaggataaaggttcgataaaa
ataggaaatcactctttcgggtgttggatttggaacagtagcggacattctcaaacgcat
ggaatggaaaatttaatggatgcaattcaggattcttgcaactactatttctattgtttg
agtgtaggatatgactattctgtggacaaacctctacctatttctatgaattcacaaaaa
atattggattatgcaaccaaattcggtttgaacgaaaagaccgggattgaaatagaagaa
acgaaaggttctgtaccgacagttggaatggagagagaaaaaaaagttattgcattaaaa
aattttttgaaagaatttttggcggataagtttgaagatattgattccaattccggtgaa
tatataactcgaattaataccattatttcatgggcagacgaaaatccatcacgtggagaa
ttgatacgaagattgagggaaataaaagtaaaagaaaaagaactgaataatgtaacagat
cgtatcaaatatgattatttcatttctatggggggatggaaagagggagatgcattcaat
ttggcgattggacagggcgcccactcttatacccctttgcaactgacaagatatgttgct
tctattgcgaataagggaaatctcaataaagtcagcttaattgataagagagaaaactat
gaaaagaccgatattatccggcatgagttggagacggaagtaatccaattgaagaataat
aaaaatttagagtatttagtgcaaggtatgaaaaatgcttccgatgaaggaacatccaaa
aacactttcaatcgttttccgattatggttgcatctaagacaggtacagcgcagagagca
ggaaagataccgactgttgatgaaaaaaaatattatttgtctcatctatcttcgtacgga
gttaactactcagatgttatgagagttgcagaagaattagaaaaaaattcaaaaacaaaa
ttacaggattatcaatacatcgttcaagcgattttaaagttaaacaagaatttgaaaaaa
gctgatttggatcaatacaaagattcttatgacgaatttgcatggtttgtttcctttgca
ccggcagaaaaacctgaaattgcagtcatatctgttattgtgcaaggtggacacgggggg
tacgccgcacctatggcacgagacatctatgctcaatattttgaattgactccgtatgga
acaaaaccacaagaaaccattcaaaagaaaatacaatttttagatgaattaaattga
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