Filifactor alocis: HMPREF0389_00984
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Entry
HMPREF0389_00984 CDS
T01663
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_00984 (sbcD)
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0389_00984 (sbcD)
Archaeal homologous recombinant proteins
HMPREF0389_00984 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Spore_III_AB
Motif
Other DBs
NCBI-ProteinID:
EFE29062
UniProt:
D6GQK9
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All DBs
Position
complement(1610723..1611886)
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AA seq
387 aa
AA seq
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MKILHLADLHIGKLLNGYSLLGEQEKVLKQVLSVIDEKKAEVVVISGDIYDRSIPPKEAM
LLYNQFLRKVLIDRNIPVLAISGNHDSAERLEAGNALMEQVHYYVEGIFKKETKRVTIED
DDGEVDFYLIPFADVAQVRALLEDDEIRSFDDAMKKTVEHIVLRKGIRSVVLAHCYAVSE
SEEHEEEKIDSQKPLSIGGKEFVDAKCFDKFDYTALGHLHRRQKVGTDKVHYPGTLLKYS
FSEEKHQKVILLVDLKGDGSVVMEEVPVELEKNVRTIEGRFEDIMEQALEDLHREDFVRF
ILEDEDMVPDAMGRLKQYYPNAMELRYVFREKEISQILSKTADRKHTVSEMAELFYQENY
EEEMSVALKEEVSEILKELGGEEDETN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcatttagcagatttacatatcggaaagttattgaacggatattcctta
cttggagaacaagagaaggtattgaaacaggtgttgtccgtcattgatgagaaaaaagcg
gaggtagttgttatctcgggagatatttatgatagaagtattccgccgaaagaggcgatg
ttgttgtacaaccagtttttgcggaaggttctgattgacagaaatattcccgtattggca
atttcgggaaaccatgattccgcagagcgacttgaggcgggaaatgcattgatggagcag
gttcattactatgttgagggaatttttaagaaggaaacgaagagagtgaccatagaagat
gatgacggggaggtggatttttatctgattccgtttgcagatgttgcacaggtcagagct
ttgttggaagatgacgagattcgaagttttgacgatgcgatgaaaaaaacggtagaacat
attgtgttacgcaagggaatcaggagtgtcgtgttggcgcattgctatgccgtttccgaa
tcggaggagcatgaggaagaaaagattgattctcaaaaaccgctttctatcgggggaaaa
gaatttgtggatgccaagtgttttgacaagtttgattatacggcgcttggacacttgcat
cgcagacagaaagtcggaacggataaggtgcattatccgggaacattgttgaagtattct
ttttcggaagaaaagcatcaaaaggttattttgttggttgacctcaaaggggacgggagt
gtcgttatggaagaagttcctgtcgagttggaaaaaaatgttcgtaccattgagggacgg
tttgaagatattatggaacaggcattggaagacttgcatcgagaggattttgtgagattt
attttggaagatgaagacatggtgccggatgcaatgggcagattgaaacaatactatccg
aatgcaatggaacttcgttatgtgtttcgggagaaagaaatttctcagattctatcgaag
acagcagatagaaagcatactgtttcggaaatggcggagctgttttatcaagagaattat
gaagaagagatgagcgtcgctctgaaagaagaggtatcggagattctaaaggaattaggg
ggagaagaagatgaaaccaattaa
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