Filifactor alocis: HMPREF0389_01004
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Entry
HMPREF0389_01004 CDS
T01663
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
faa
Filifactor alocis
Pathway
faa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0389_01004 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_01004 (priA)
Enzymes [BR:
faa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0389_01004 (priA)
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0389_01004 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
Helicase_C
Zn_ribbon_PriA
PriA_C
Zn_ribbon_6
Flavi_DEAD
PIF1
TrwB_AAD_bind
ADDB_N
nSTAND6
FliMN_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
EFE29082
UniProt:
D6GQM9
LinkDB
All DBs
Position
complement(1637397..1639634)
Genome browser
AA seq
745 aa
AA seq
DB search
MKQLIEVAILSRGSGIYTKFDYYADSCVQIGQRVEVPFGKGSSVALGMVVGIDKEPEQNM
EYKEVLRCIDETPVVDQAILDISKEIADDYLCSFQDAVGLFLPKGEKATFDKTKVVLSLA
TQEQWDEYLLSQRKNAYIKLELARRLSQVGELSWEEIRNDITPHPSAPIQQMEEKGLVKV
IVQEHNRFETKKSQWIPAANLMFSKEQNDVTEEIWNGSTEDGSKTYLIHGITGSGKTEIY
IELIRRTVQQGKQAIVLVPEISLTPQMIERFQKIFGDGVAFLHSALTEKEKKIQWHKMKQ
GACSIAIGPRSALFVPFWNLGMIIVDECHEDTYHSEMTPRYDAVEVAKKLGDYRNATVVL
GSATPTIEQLYDCQNGSMIRLNLENRVNGAILPQISVVDMREELRNGNNSMFSGYLLFRI
RETLEKGEQVLLFLNKRGFSKSLTCTDCGYVHKCPNCDITLTYHKQNNALKCHYCNYQMP
FDRTCPDCGGILKDISFGTQKIQELIEEEFSNAKVIRMDRDTTEKRGQQEQYLKSFERGE
ANVLIGTQMIGKGLNFPNVTLVGILQADQGMDMPDYRGSEKVFQMLEQVSGRAGRFEKRG
ESVIQTYRTESSLFHYLLERDYDGFYQEELAIRKAFFYPPYGSIFRIVVSSVSLDDSAET
AKRWEQALHFYFQKKNLQSAILGPAPCLIQRLEKKYRWHLLIKVKNLEEETVIRNMIRYL
QTVKRNVLYGKKSVVIVEKNPRNIL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagttgatagaagttgccattttaagcagaggtagcggaatttatacaaaattt
gattattatgcggattcttgtgttcaaatcgggcagagggtggaggttccgttcggaaaa
ggcagttctgttgcactgggaatggtggttggaattgacaaagaaccggagcagaatatg
gaatacaaagaagtattgcgatgtattgatgaaacacctgttgtagatcaggcgatattg
gatatttccaaagagattgccgacgactacctctgttcttttcaagatgctgtcggattg
tttttgcccaagggagaaaaagcgacatttgacaaaacaaaggtcgtcctttctttggca
acacaggagcagtgggatgagtatctcttatcccagagaaaaaatgcttatattaagttg
gaattggcaagaaggttgtcgcaagtgggagagctatcgtgggaagagattcgaaatgat
atcacacctcatccgtctgctccgattcaacaaatggaagaaaagggacttgtaaaggtc
attgttcaggaacacaatcggtttgaaacaaagaaatcacagtggattcctgcagcaaac
cttatgttcagcaaagaacagaacgatgttactgaagaaatttggaacggttcaacagaa
gacgggagtaaaacctatttgattcatggaattacaggttccggaaaaacggaaatctat
attgaattgatacgaagaacggttcaacagggaaagcaggctattgttctggttcctgaa
atttcactcactccgcagatgatagaacgatttcaaaagatttttggagacggagttgca
tttttgcacagcgccttgacggaaaaagagaaaaaaattcagtggcataagatgaaacaa
ggagcttgttcgattgccatcggaccgcgctcggcactgtttgtaccgttttggaatttg
ggcatgattatcgtagacgagtgtcacgaagatacgtatcactctgagatgacaccgaga
tatgatgcggtggaagtggcaaaaaaattaggggactatcgcaatgcgacggttgtattg
ggttcggcaacgcctacgattgaacagttatatgattgccaaaacggaagtatgattcgt
ttgaacttggagaatcgtgtgaacggagcgattcttcctcaaatatccgttgtggatatg
agagaagaattgagaaacggaaacaattcgatgttcagcggatatcttttgtttcggatt
cgagagacacttgaaaaaggagaacaggtgctgttgtttttgaataagcgaggtttttcc
aagagtttgacttgtacagactgcggttatgttcacaaatgtcccaactgtgatatcact
ttgacgtatcataagcaaaacaatgcactgaaatgtcactattgcaattatcagatgcca
ttcgacagaacttgtccggactgtggcggaatactgaaagatatttccttcgggacacaa
aaaattcaagagttgattgaggaagaattttcgaatgcgaaagtgattcgcatggacaga
gatacgaccgagaaaagaggacaacaggaacaatatttgaaatcctttgaaagaggagaa
gcgaatgttctgattggaacgcagatgataggcaaaggactcaactttcccaatgtgaca
ttggtaggaattttgcaggcggatcagggaatggatatgccggattatcgaggaagcgaa
aaagtgtttcaaatgttggagcaggtttcgggacgtgccggaagatttgagaaacgggga
gaatctgtgattcagacctatcgaacggaaagcagtctgtttcattatcttttggaacga
gattacgacggattttatcaggaagagcttgcgattcgaaaggcgttcttttatccgccg
tatgggagtatttttcgaattgtggtaagttccgtttctttggatgacagtgcggaaacg
gcaaaacgatgggagcaggctctgcatttttattttcaaaagaagaatctacaatccgct
attttgggaccggcaccttgtttgattcagcgattggaaaaaaaatatcgatggcatctg
ttgattaaggtaaaaaatttagaagaagaaaccgtgattcgtaacatgattcgatatctt
caaacagtgaagagaaatgtgttgtatggaaagaaaagtgttgtcattgtggaaaaaaat
cccaggaatattttgtag
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