KEGG   Filifactor alocis: HMPREF0389_01038
Entry
HMPREF0389_01038  CDS       T01663                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
faa  Filifactor alocis
Brite
KEGG Orthology (KO) [BR:faa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:faa02048]
    HMPREF0389_01038 (hsdR)
Enzymes [BR:faa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0389_01038 (hsdR)
Prokaryotic defense system [BR:faa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0389_01038 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like HSDR_N_2 KdpD Nucleolin_bd DHFR_1
Other DBs
NCBI-ProteinID: EFE29116
UniProt: D6GQR3
LinkDB
Position
complement(1671409..1674552)
AA seq 1047 aa
MPGFIEASYENSIIELFQNNLGYEYVYGPDIERDFYSPLYEDVLVDSLYRLNRGLPDNAI
QDALYKLRNFENGELVQKNAIFMDYLQNGIPVRYFVSGEERSSIIYLVDYKNVENNSFIV
ANQWTFIENSNKRPDVILFLNGLPVVLVELKSPSREETDASEAYRQLRNYMHEIPSMFIY
NAICVMSDQLISKAGTITSGEDRFMEWKTKDGNYENTQYAQFDTFFEGMFQKERLLDIIK
NFICFSNEGINTFKILAGYHQYFAVRKAIESTKHAIITDGKGGVFWHTQGSGKSLSMVFY
AHLLQEALESPTIVVLTDRNDLDDQLYSQFAKCKDFLRQEPLQAESRENLKTLLAGRKAN
GIIFTTMQKFEESNEPLSERRNIIVMADEAHRGQYGLTEKIKITKNEDGDEVAKRIIGTA
RIIRNTLPNATYIGFTGTPISAKDRSTREVFGDYIDIYDMTQAVEDGATRPVYYESRVIK
LNLDETTLKLIDAEYDLMALNADDEVIEKSKRELGQMEAVLGNDNTINSLVCDIIDHYEN
NRENLLTGKAMIVAYSRPIAMKIYKKILKLRPAWTEKVEVVMTSGNNDPEEWRQIIGNKH
HKNELAKKFKDNSSLMKIAIVVDMWLTGFDVPSLATMYVYKPMSGHNLMQAIARVNRVFQ
DKEGGLVVDYVGIATALKQAMNDYTLRDKKNYGDTDVAKVAYPKFLEKLSVCRDKFHGYD
YTKFINGTDLERAKTISGAVNFIMDREKVDDKDSFVKEALMLHQALSLCSSLVDKDSRFE
AAFFEAVRVLVLRLTNTGVDKKISLPEMNARINELLKQSIKSDGVINLFSDIKEEFSLFD
PKFLQEVANMKEKNLAVELLKKLIAEQVSVYRRTNIVKSEKFSEIMQRSLNAYLNGMLTN
EEVIEEMLRLAKQIAAAHQEGDKLGLTADELAFYDALTKPQAIKDFYENEELIAITKELA
DTLRKNKTIDWQKRESARAKMRMLIKKLLKKHKYPPEGMDDAVQTVMKQCELWTDNYNFE
EDYNVYSYMNYTDTSLPLVAEEEEKYN
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgccaggattcatagaagcatcttatgaaaattcaataatagaattattccaaaataat
ttgggatatgagtatgtatatggtcctgatattgaaagggatttttacagtccattatat
gaggatgttttggttgattctctgtatcgtttaaatagaggattgcccgataatgccatt
caggatgctttgtacaaacttagaaactttgagaacggagagcttgtacagaaaaatgca
atttttatggactatctgcaaaatggtattcctgtaagatattttgtcagtggagaggag
cgttcctctatcatctatcttgtcgattataaaaatgtcgaaaacaactcctttatagtt
gctaatcaatggactttcattgaaaacagtaacaaacgtcccgatgtaattctgttctta
aatggtttgccggttgtattggttgaactcaaatctccttcccgtgaagaaacggatgct
tcagaagcgtatagacaactccgtaactatatgcatgaaattccgtctatgtttatatat
aacgctatttgtgttatgagtgaccagttgatatccaaagctggtacaattacttccgga
gaagatcgctttatggagtggaaaacaaaagatgggaattatgaaaatacacaatatgca
cagtttgatactttctttgagggaatgtttcaaaaggaaagactgcttgatatcatcaaa
aactttatttgcttttcaaatgaggggattaacacatttaaaattctcgccggataccac
caatattttgcggtaagaaaagcgattgaatcaacaaaacacgctatcattaccgatggt
aaaggaggtgtattttggcatacacaaggaagcggtaaatcgctttcaatggtgttctat
gctcatttattgcaggaagcattggagagccctactattgttgtacttactgacagaaat
gaccttgatgaccagctctatagtcagtttgcaaagtgtaaggactttttaaggcaagaa
ccgttacaagcagaaagcagagaaaatctaaaaactttgcttgcaggcagaaaagcaaac
ggcataatctttactacaatgcagaaattcgaggagtctaacgagcctttatctgaacgt
cgaaatattatagttatggctgatgaagctcatagaggacaatatggacttactgaaaag
attaaaattacaaaaaatgaagatggtgatgaagtagcaaagcgtattattggcacagca
agaattattcgtaatacacttccaaatgctacatatattggatttaccggcacgcctatt
tcagcaaaagatcgtagcacccgtgaagtatttggcgattatattgacatatatgatatg
acgcaagcggttgaagatggagcaactcgtccggtttattatgaaagtcgtgtcattaag
ttaaaccttgatgaaactaccttgaaattaattgatgctgagtatgatttgatggctctt
aatgcagatgatgaagttattgaaaagagcaaaagagagcttggccagatggaagcagtg
cttggaaatgataacactataaattcccttgtttgcgacattattgaccactatgaaaat
aatagagagaatctgcttaccggtaaggcgatgattgttgcatattctcgtcctattgcc
atgaaaatttataagaaaatattgaaacttcgcccagcttggactgaaaaagtagaggtt
gtgatgacttccgggaacaacgatccggaagaatggcgacaaattattggtaataaacac
cataagaatgagcttgccaagaaattcaaagataacagcagtctgatgaagattgcgatt
gttgtagatatgtggttgacaggatttgatgttccgtctcttgctactatgtatgtttat
aagcctatgtccggacacaatcttatgcaagcaattgctcgtgtaaaccgtgtatttcaa
gacaaagaaggggggcttgttgttgactatgttggaattgctaccgctctaaagcaagca
atgaatgactatactttgcgcgataaaaagaactatggcgatacagatgttgccaaagtt
gcatatccgaagttcttggagaaattatcagtttgccgtgataagttccatggatatgat
tatacaaagtttattaatggtacagatctcgaaagagcgaagactatcagtggtgccgtg
aattttattatggatagagaaaaagtcgatgataaagactcattcgtaaaagaagctctt
atgcttcatcaggcgctgtccctttgttcatcgttagttgataaagatagtagatttgag
gcagcattctttgaggctgttcgagttcttgttctcagacttaccaataccggtgttgat
aaaaagatttccttgccggaaatgaatgcaagaataaatgaacttttgaaacagagtatt
aaaagtgatggcgtaattaaccttttctcagatataaaagaagaattttctttgtttgac
ccaaaatttcttcaagaagttgcaaatatgaaagagaagaatcttgcagtcgaactatta
aaaaaattaatcgcagagcaagtatctgtctaccgtagaacaaatattgtaaaatctgaa
aagttcagcgagattatgcagcgttctctcaatgcatatcttaatgggatgcttaccaat
gaagaagttatagaagagatgttaaggttggcaaaacagattgcagcggcacatcaagag
ggagataaattaggactgactgctgatgaactggctttttacgatgccttaacaaaacca
caggcaatcaaggatttttatgaaaacgaagagttgattgcaataacaaaagagttagca
gatactctacgtaagaataagacgattgattggcagaagcgtgaatcagcgagagctaaa
atgcgtatgctgatcaagaaacttttgaaaaaacataaatatccgcctgaaggaatggat
gatgcagttcaaactgtaatgaaacagtgtgaactttggacggataattataactttgag
gaagattataatgtttattcctatatgaattataccgatacatcactgcctttagtagca
gaagaggaagagaaatataattga

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