Filifactor alocis: HMPREF0389_01156
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Entry
HMPREF0389_01156 CDS
T01663
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_01156 (vsr)
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HMPREF0389_01156 (vsr)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
EFE27904
UniProt:
D6GSR9
LinkDB
All DBs
Position
50471..50914
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AA seq
147 aa
AA seq
DB search
MTYQNGLVRIMSKKTKEQISFNMRRVKNKDSEIELLLRRELRSRNLYYRKNVKTIFGKPD
IAFIGKKIAVFVDSEFWHGYNWAEKKKEIKSNQEFWISKIERNMQRDVEVNEHLQSQGWL
VLRFWGNDIKKNVTTCADIVESAFRER
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
ttgacctatcagaacggattggtaagaataatgagtaaaaagaccaaagaacaaatcagt
ttcaatatgcgccgtgtcaaaaacaaagattctgaaattgaattacttcttcgcagagaa
ctccggtctcgtaatttgtactatagaaagaatgtgaagactattttcggaaagcctgac
attgcatttataggaaagaaaattgcagtgtttgtcgatagcgagttttggcacggctac
aactgggctgaaaaaaagaaagaaatcaagagcaatcaagaattttggatttctaaaatc
gaaagaaatatgcagcgcgatgtggaagttaacgaacacctacaatcgcaaggatggctc
gtccttagattctgggggaatgacattaaaaaaaacgtgactacttgtgccgatatcgtt
gaatctgcatttagggagagatga
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