KEGG   Filifactor alocis: HMPREF0389_01171
Entry
HMPREF0389_01171  CDS       T01663                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3-HD
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
faa  Filifactor alocis
Brite
KEGG Orthology (KO) [BR:faa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:faa02048]
    HMPREF0389_01171
Enzymes [BR:faa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMPREF0389_01171
Prokaryotic defense system [BR:faa02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HMPREF0389_01171
SSDB
Motif
Pfam: Cas3-like_C_2 HD DEAD Helicase_C ResIII Cas3_HD AAA_22 Dna2
Other DBs
NCBI-ProteinID: EFE27919
UniProt: D6GST4
LinkDB
Position
33001..35589
AA seq 862 aa
MHNSSNLLAHYDRENQKEQLLTNHLLNTATIASDIGKEIGMGNLCFLLGVLHDSGKADIQ
FQTMLKNMPGSKNIRVIHSTAGAYFLFETKYNRNLEDRKESKSYNEFIEVCMYVIEAHHG
LFDIVGKRDEDGFSGMDYVNKIFERVEHYQADSRYDKEKLKHFIDNEVALIVKSELGFDS
IEELIDSAFQEYHHIMEQFTKNYVPFESESEKNRKRNKNHKLKERRFFDMMLVRLLLSII
KTADVEDTINAYDFLIQRRTEEEIRCLKRHYIERIEGEYKKYHRNNNATKPINQMRNQIA
DTLLVKGQQDNAGIYRLEVPTGAGKTKAVLRYALHQMDDKSKNRFVYITAFLSVLEQNAG
EIKAVIGEDGVLEHHSNVDLFHGTDKYSKGSFDEKEDIEYVQRSFIVDSWDSPVVLTTMV
QFFSTLFKGKSANLRRFSSLINSVIVIDEVQSLPIEVMYFFNLTMNFLRNVMNCTVVLCT
ATQPIYDDKSIRHKLQYGSLSEENKNADLVLLSQEDRKCFDRYSVKKFKDRTVDSLENSH
TSIEEVSQFVFENRDKSILIVVNTKAAAGSIVRSIDALNIPESDVYYLTTNLCPAHRKNI
ISEIKERLSLGDKIICVSTQLIEAGVDVDFELVMRSYAGLDSIVQVAGRCNREGKLPNGG
EVILFNPDEGIEHTKRILGIADKKKITEEILAQRHGEIQLGSLVEEFYTSYYFNEADSSN
RMEYRLKNDESSLFDLFIKGGGIVKSDIKNETGSLRGRLREVADKFQLISDDTEGVFVFY
EDGIEDLNDLLRIAEQRMISSQDWLKIKQLIRKLQPYSINIYQSNKLNEFVDSYLNGSIK
VLQNDHYNERFGASEEIDSLII
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgcataacagctcaaatttgcttgctcactatgatagagaaaatcaaaaagaacaactt
ttaacaaatcatttattaaatacagcaaccatcgcatccgatatcggaaaagaaatcgga
atgggaaatctatgctttcttttgggagtacttcatgatagcggaaaagctgatatacaa
tttcaaacaatgttgaaaaatatgcctggcagcaagaatattagagtaatacactcgact
gcgggggcatattttttatttgaaacaaaatacaacagaaatcttgaggataggaaggaa
tccaaaagttacaatgagtttattgaagtttgtatgtatgtgatagaagcgcatcatgga
ttgtttgatatcgttggaaaacgcgatgaagatggtttctccggtatggattatgtaaac
aaaatttttgaaagagtggaacattatcaggcggacagtaggtatgacaaggagaaactg
aaacattttattgacaatgaagtagcgttgattgtcaaaagtgaattggggtttgattcg
atagaagaattgattgattctgcatttcaggaatatcatcacatcatggaacaattcacg
aaaaattatgtgccctttgagagcgaaagtgaaaaaaacagaaagaggaataaaaatcat
aaactgaaagaacgaagattttttgatatgatgttggttcgattattgttgtcgataata
aaaacagctgatgtggaagacaccatcaatgcgtatgactttttgatacagaggagaaca
gaagaagagatacgatgtttgaaaagacactatattgagagaattgaaggggaatacaaa
aaatatcatagaaataacaatgctacgaagcctatcaaccaaatgagaaatcagattgca
gatactttgttggtgaaaggacagcaggataatgcaggaatctatcgtttagaagttccg
accggtgccggaaaaacgaaggctgtattgagatacgcattgcaccaaatggacgacaaa
tccaagaacagatttgtttatattacagcatttttgtcagttctggaacaaaatgccgga
gaaatcaaagcggtgataggggaagatggggtgttggaacaccattccaatgtagatttg
ttccatggaacagataagtacagtaaagggagtttcgatgagaaagaggatatagaatat
gttcagaggtcttttatcgttgattcatgggacagtccggttgttctaacgacaatggtt
caattttttagtacgctgttcaagggaaaatctgcaaatttaaggcggttttcatctctt
atcaacagtgttatcgtcattgatgaagttcagtcactaccgattgaagtaatgtatttt
tttaatttaacaatgaattttttgagaaatgtaatgaattgtaccgtggtactttgtacg
gcaacgcaaccgatttatgatgataagagtatcagacataaactccaatatggcagctta
agcgaagaaaacaaaaacgccgatttggttctattatcacaagaagatagaaaatgcttt
gacaggtattcggtgaagaagtttaaggatagaactgttgacagtttggagaacagccat
acttccattgaagaagtttcacaatttgtgtttgaaaacagagacaaatcaatcttgatt
gtagtaaatacaaaagctgccgcgggtagcattgttcggagtatagatgctttgaacata
cctgagagtgatgtatactacctcactacgaacctctgtccggcacatcggaagaacatc
atatcagaaataaaagaacggctctcattgggcgacaaaataatctgtgtcagtacacag
ttgatagaggcaggagttgatgttgattttgaacttgttatgagatcctatgcgggttta
gattcgattgttcaggtcgcaggtcggtgtaacagagaaggaaaattaccaaatggcgga
gaagtcatcttgttcaatccggatgaaggcattgaacataccaaaagaattcttggaatt
gccgataaaaagaaaattacggaagagattcttgcacaaagacatggagaaatacagttg
ggcagtttggttgaagaattctacacaagttattatttcaatgaggcggatagtagcaac
agaatggaatatcgtctaaaaaatgatgaatcttccctattcgatttgttcataaagggt
ggaggaattgtaaagagcgatatcaaaaatgaaacggggtctttgagaggacgactaaga
gaggtagcagataaatttcagctcatttcagatgatacggagggtgtttttgttttttat
gaagatgggattgaggatttgaatgatttgttaaggattgcggaacagaggatgatttct
tcacaagattggttgaaaataaaacagctcatcagaaaattgcaaccctactctatcaac
atttatcagagcaacaagttgaatgaatttgtggacagctatcttaacggatccatcaag
gtattacaaaatgatcactacaatgaaagattcggagcaagtgaagaaattgattctctt
atcatataa

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