Filifactor alocis: HMPREF0389_01183
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Entry
HMPREF0389_01183 CDS
T01663
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faa03032
]
HMPREF0389_01183 (gyrA)
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_01183 (gyrA)
Enzymes [BR:
faa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0389_01183 (gyrA)
DNA replication proteins [BR:
faa03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0389_01183 (gyrA)
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0389_01183 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
UDP-g_GGTase
AnfO_nitrog
Motif
Other DBs
NCBI-ProteinID:
EFE27931
UniProt:
D6GSU6
LinkDB
All DBs
Position
20035..22473
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AA seq
812 aa
AA seq
DB search
MSQEEMRDKIIEVDLKHEMEQSYIEYAMSVIVGRALPDVRDGLKPVHRRILYSMGQNNLT
PDKPYRKSATIVGDVLGKYHPHGDTAVYDALVKMAQDFSMRYPLVDGHGNFGSIDGDSAA
AMRYTESRMEKLSMEMLRDLNKETVDMVPNYDENEWEPSVLPARYPNLLVNGSNGIAVGM
ATSIPPHNLGEVIDAVVELIDNEDATLEDILKHIKGPDFPTGAHIMGNSSMLQAYRTGRG
KVVQRAKTSFEEMSGGKTRIVVTEIPYQVNKARLVEKIAELMKDKRIDGITHIGDESNRK
GMRIVIELRRDVNPDIVLNQLFKFSPLQQVFSIIMLALVNNIPKVLTLEQMLRLYLKHQE
EVVTRRTQFDLKKAQDRIHLVEGLLKAIDHIDEVIAIIRSSYSDAMERLMERFDFSEIQA
KAILDMQLRRLQGLEKEKLEDEQKDLQQKIDYYQEILSDRSLLLSIIKEEILEIKAKYGN
ERRTTFLASYEDIDIKDMIPDDEVTVTLTHLGYIKRVGIDTYKTQKRGGKGIASMSTRDE
DFVDKLLLTSNHSKVIFFTNMGRIYRLNTYEIPESSRTAKGTNIVNILPLEDGEKVNTML
SIREEQASSGFVVMCTRKGIMKKTPLEEFQRSNRNGLIAISLKEDDELIGVELTDGNCNI
ICVARNGKAIMFDESDIRSMGRTAQGVRAMNLEEGDEIVSMMIADPEKDVLIISERGYGK
RTPIAEYNLQTRGGKGSRTYKITEKTGRLVGGKVVSNDDEIMIVNIDGTLIRMEVKGISV
LSRVTSGVRLMKTAENQDIASFEKIEISEEEE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaagagatgagagataagattattgaggtagatttgaagcatgaaatggag
caatcctatattgaatatgcgatgagtgttatcgtcggtcgcgcacttcctgatgtaaga
gacggtttgaaacctgttcacagaagaattctatacagtatgggacaaaataatttgaca
ccggataaaccttaccgaaaatccgctaccattgtaggggatgtactgggaaaataccat
ccgcacggagatacggcggtatatgatgccttggttaagatggcacaggatttttcgatg
agatatcctttggtagacggacacggaaacttcggttcgattgacggagacagtgcggct
gcgatgcgttataccgaatcgagaatggaaaaattgtcgatggaaatgcttcgtgattta
aacaaagagaccgtcgatatggttccgaactatgatgaaaatgagtgggaaccgagtgtt
ttgccggcacgatatccgaatttgttagtcaacggttccaacgggattgcagtagggatg
gcaacttccattcctcctcacaatctgggagaagttatcgatgcggtggtagagttgatt
gacaatgaagatgcgaccttggaagacatcctgaaacacatcaagggaccggattttccg
acaggagctcacattatgggaaattcttccatgttgcaagcatatcgaacaggaagagga
aaagttgttcaacgagcaaaaacttcctttgaagaaatgtcaggcggaaaaacgagaatt
gtcgtgacggaaattccatatcaggtgaataaggcacgattggtggaaaaaattgcagag
ttgatgaaagacaagagaattgacggaatcacccatatcggagatgaaagtaaccgaaaa
ggaatgcgaattgtcattgaattgagaagagatgtgaatcctgatattgtattgaatcag
ctgtttaagttttctccgttgcaacaggtgttttccatcattatgctggcattggtcaac
aacattccgaaagtgctgacattggagcagatgttgcgattgtatctcaaacatcaggaa
gaagttgtcacaagaagaacacagtttgatttgaaaaaagcacaggatagaattcatttg
gtagaaggcttgttgaaggcgattgaccatattgatgaagtcattgcgattatccgttct
tcctattccgatgcgatggaacgattgatggaacgctttgatttttccgagattcaggca
aaagctattttggatatgcagttgagaagattgcaaggtttggaaaaagaaaaattggaa
gacgaacaaaaagacttgcaacaaaaaatagactattatcaggaaatcttgtcagatcgt
tcactgcttctttccatcatcaaagaagaaattttggaaatcaaggcgaaatacggcaac
gaaagaagaacgacattcttggcgtcctatgaagatattgatatcaaagacatgatacct
gatgatgaggtaacggttactttgacacatttgggatatatcaaaagagttggaatcgat
acctataagacacagaagagaggcggaaaagggattgcatccatgtctaccagagatgaa
gattttgtggacaaactgcttttgacaagcaaccatagcaaagtgattttctttaccaat
atgggaagaatttatcgtttgaatacctatgaaattccggaaagttccagaacggcaaag
ggaaccaatattgtaaatatcttgcctttggaagacggagaaaaagtcaataccatgctt
tcgattcgtgaagaacaggcatcatccggatttgtggtaatgtgtactcgcaaaggaatt
atgaaaaagacaccgttggaagaattccaacgaagcaaccgaaacggtttgattgcaatt
tcactcaaagaagacgacgagctgatcggtgtggaactgacagacggaaattgcaacatt
atctgtgttgcccgtaacggaaaagcaatcatgttcgatgagagcgatatcagaagtatg
ggacgtactgcacagggagttcgcgcaatgaacttggaagaaggagacgaaatcgtttct
atgatgattgcagatcccgaaaaagatgtgttgattatttcagagcggggatacggaaag
agaacaccgattgcggaatacaaccttcaaacaagaggaggaaaaggttcccgaacctat
aagattactgaaaagacagggcgattggtaggcggaaaagtggtatccaacgatgatgaa
attatgattgtcaatatagacggaaccttgattcgtatggaagtcaaaggcatttccgta
ctgagtcgtgttaccagcggagttcgtctgatgaagacggcagaaaatcaggatattgct
tcgtttgaaaaaatcgaaatcagtgaagaagaggaataa
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