Filifactor alocis: HMPREF0389_01361
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Entry
HMPREF0389_01361 CDS
T01663
Name
(GenBank) putative ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
faa
Filifactor alocis
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_01361
Enzymes [BR:
faa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0389_01361
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HMPREF0389_01361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
EFE27730
UniProt:
D6GTC3
LinkDB
All DBs
Position
complement(1111493..1114861)
Genome browser
AA seq
1122 aa
AA seq
DB search
MLHILSSVSVQRNKERILENYQKQEAEHSAYIVVPEQATMQMDVWILDEMKRESLMDLRV
VSFQKLSKEVLESTFGANRPYIDNIGKAMVLRTVFEDFPEEFELYRPVAQRQGFLTKMES
LLTELKRNDIQSTALKELANRTEDKLFSQKLKEVSFLQEQMELRLTGHYADSEDKMNMLV
NQIASCGWIQDLDFYFFGFHSFTAIEYRIVEQLIMYAHNVYITLPMEEKESSDTINLFQT
TQETVKKLREFAQKSNIPVKVEFEDTNPVLEEFQLLGKNLFDYKNVVYPKETSSVSLTVA
KTTEEEVHWICNKICELVQEEGYRYREIGLLVTDIREYGRFIRQIFPMYHIPVFVDEKKD
LIHSPAMHAIFSLWDIVSNGFRYEDVFSFLKAGFTSFSQSEIERLENFVLAHKIRGEMYF
QEKYFLKGEESEEERHQILDIRQRFEDMLLPFYRSIKKKGMVEEFAKQSVSFLIEKNFPQ
KIEEYVEELKESGLEEFADENRQVWNIFVSILEQMVELLGSRMVKATEFRDILYAGIQGH
KVGILPPSQDQVIVGTLDRSRTTPTEHLFVLGLHDGMFPKVQKEGSVLEEEERTKLLQYG
FHLSSVREKLQAEERLSWYNHITQTKTAVYLSYAEMSYDKKVLYPSFYVDKIRRQFPKMN
VIVPKRYDDSMLYSKQAFLQQLAQMTRPVLEESDSLEQEERAFCLQGWDYLKQQQEETLF
QSAVSENPSVRYIPQKYVTSLYGNKVYFSASGLEQYARCPYKHFIHRALSPKERARYEME
ETDIGILVHGCIDEFTDFLKKHPELSEQWDEKRNQEEINAIFSQYADKMLGVSFEDNARN
QYLLRKIRKTTEETAKYVVRHLNLGTFKIWGQEVGFGYGKDYPAVELIEDTAYLRGRIDR
VDVCHKDDKDYIKVIDYKTGKKTFHLSDAWQGYDLQLLFYLYALLYSRAIGKDKVYPAGA
FYFPAVYSLLSTEEENEENIEKLQTDSWLMEGIALKEEEILKAMDQQIEEKSSVFRGVGR
KNTFEKENLLTQEEFEQILSHSYQLAKNMATEILEGKIQASPTMEKGNRKACDFCRYQSI
CGFDERKKDCIYRVVKEYSYEQIKAEIEEQIHSSEEKEESHE
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttacatattttgagttctgtttccgtacaaagaaacaaggaacgcattttggaaaac
tatcaaaaacaggaggcagaacattctgcttatattgttgttccggagcaggcaaccatg
caaatggatgtttggattttggatgagatgaagagggaaagtttgatggatttgagagtg
gtaagttttcaaaaactttccaaagaagtgttggagtccactttcggtgcaaatcgacca
tatattgataatatcgggaaagctatggtacttcgaactgtttttgaggattttccggaa
gagtttgagctatatcgtccggtagcccaaagacagggttttttgacaaaaatggagagc
ttgctgacagagttgaagagaaatgatatccaaagcacagcactgaaagaactggcaaat
cgtacagaagataaattattttctcaaaaattaaaagaagtttcttttctgcaagaacag
atggaattgcgtttgacgggacattatgcagacagtgaagataagatgaatatgcttgtg
aatcaaattgcgtcttgtgggtggattcaggatttggatttttattttttcgggttccat
agttttacggcaatcgaatataggattgtagagcagttaattatgtatgcacacaatgta
tatattaccttgccgatggaagagaaggaatcctctgatacaatcaacttgtttcaaacg
acacaagagacggtgaaaaagttaagggaatttgcgcaaaaatcaaatatccctgttaag
gtagaatttgaggacacaaatcctgttttagaggaatttcaattgttaggtaaaaactta
tttgattataaaaatgtggtctatccgaaagagacttcttccgtttctcttacagtcgca
aaaacgacagaagaagaagtccattggatttgtaacaaaatttgtgaattggtacaggaa
gagggatatcgataccgtgaaatcggactgttggtgaccgatattcgagagtatggacga
ttcattcgacaaatttttccgatgtatcatattccggtatttgtggatgaaaaaaaagat
ttgattcacagtccggcaatgcacgcgattttttctttatgggatatagtatccaacgga
tttcgatatgaagatgttttttcgtttttgaaggcagggtttacctctttttctcaaagt
gaaatcgaaagattggaaaattttgtgttagcgcataaaatccgcggagaaatgtatttt
caggaaaaatattttctgaaaggagaggaatctgaggaggaacgccatcagatattagac
attcgacaacggtttgaggatatgttgctgccattttaccgctctatcaaaaagaaaggg
atggtggaggagtttgcaaaacagagcgtttcttttttgattgaaaaaaatttcccacaa
aaaattgaggaatatgtagaagaattgaaagagtccggattggaagaatttgccgacgaa
aatcgacaagtgtggaatatctttgtttctattttggaacagatggtcgaattgctggga
agtcgtatggtaaaggcgacggaattcagggatattttgtatgcgggaattcaagggcat
aaggtcggaatcttgccaccatcacaggatcaggtcattgtcggaacgttggataggagc
cgaacaacaccgacagagcatctttttgtgctcggattgcatgacggaatgtttccgaaa
gttcaaaaagagggttccgttttggaagaagaagaaagaacgaagctgttgcagtacgga
ttccatctttcttccgttcgtgaaaaattacaggcggaggagcggttgagttggtacaac
catatcacgcagaccaaaacagccgtttatttgtcgtatgctgaaatgtcctatgacaag
aaggtattgtacccctccttttatgtagataagattcgtcgacagtttccgaaaatgaat
gtgatagtacctaaaaggtatgatgattcgatgttgtattccaaacaagcctttttgcaa
cagttggcacaaatgacaagaccggttttggaagaatccgattctttggaacaggaagaa
agagccttttgtttgcagggatgggattatttgaaacaacaacaggaagagacactattt
caatctgccgtttcggagaatccaagtgtaagatatattccgcaaaaatatgtgacttct
ctttatggtaacaaggtatatttcagtgcatccggattggaacagtatgcacgttgtccg
tacaaacattttatccatcgggcgctttctcccaaagagagagcaaggtatgagatggaa
gaaacggatatcggtattttggttcatggatgtattgatgaatttactgattttctgaag
aaacatcccgaactatctgaacaatgggacgagaagcgcaatcaagaagaaatcaatgcg
attttttcgcagtatgcagacaaaatgttgggtgtttcttttgaagacaatgcaagaaat
caatatttattgcgtaaaattcgaaaaacgacagaagaaactgctaaatatgtggttcgt
catctcaatttaggcacattcaaaatatggggacaagaagtgggattcggatatgggaaa
gactatccggcagtagaattgatagaagataccgcttatttaaggggaagaattgaccgt
gtcgatgtgtgtcataaagacgacaaagactatatcaaagtcattgactataagaccgga
aagaaaacatttcatctttctgatgcgtggcaaggatatgatttgcagttgctgttctat
ctctatgcgttgttgtacagtcgggcaatcggaaaagacaaggtatatcccgcgggagca
ttttattttccggcagtctattctctgctttcgacagaggaagagaatgaggaaaatatt
gaaaaattacagacagacagttggttgatggaaggaattgccttgaaggaagaggaaatt
ttgaaggcgatggatcaacaaatcgaagaaaaatcatctgtatttcgtggagttggacgc
aaaaacacatttgagaaagaaaacttgttgacacaagaggaatttgaacagattttgtca
catagttatcagcttgcaaaaaacatggcgacagaaattttggaaggaaaaatacaagcg
agtccgacaatggaaaaaggaaatcgaaaagcgtgtgatttttgcagatatcagtcgatt
tgcgggtttgatgagagaaaaaaagattgtatctatcgtgtggtcaaagagtacagttac
gaacagattaaggcggaaatagaggaacaaatccattcatctgaagaaaaggaggagagc
catgagtga
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