Filifactor alocis: HMPREF0389_01435
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Entry
HMPREF0389_01435 CDS
T01663
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
faa
Filifactor alocis
Pathway
faa03030
DNA replication
faa03430
Mismatch repair
faa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0389_01435 (dnaX)
03430 Mismatch repair
HMPREF0389_01435 (dnaX)
03440 Homologous recombination
HMPREF0389_01435 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faa03032
]
HMPREF0389_01435 (dnaX)
03400 DNA repair and recombination proteins [BR:
faa03400
]
HMPREF0389_01435 (dnaX)
Enzymes [BR:
faa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0389_01435 (dnaX)
DNA replication proteins [BR:
faa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0389_01435 (dnaX)
DNA repair and recombination proteins [BR:
faa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0389_01435 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_19
AAA_24
DnaX_C
AAA_14
TIP49
AAA_7
Rad17
AAA_18
DUF815
AAA_2
AAA_11
Mg_chelatase
AAA_16
RNA_helicase
DNA_pol3_gamma3
ABC_tran
RCF1-5-like_lid
nSTAND3
AAA_assoc_2
DEAD
TsaE
Motif
Other DBs
NCBI-ProteinID:
EFE27804
UniProt:
D6GTJ7
LinkDB
All DBs
Position
complement(1006649..1008250)
Genome browser
AA seq
533 aa
AA seq
DB search
MHQALYRVYRPKTFDDIVGQEHITSVLKNQVAEDTVNHAYLFCGPRGTGKTSTAKVLARA
VNCTGEIKPCYQCKSCEQSSLDIIEMDAASNNSVDNIRDIRDNIVFMPSVSRYKVYIIDE
VHMLSQGAFNALLKTLEEPPSHVIFILATTEPQKIPATVLSRCQRFDFKKIDDSILTQQL
EKVLLQEGKEFEADAVQCIVQKSDGGMRDALSLLDKVMNLSKLTKQEVIQALGEVQEETY
LAFIQFMKDKNIPELLSLIEQLNQNGLDMKQFVVDLLYYLKESLLKMWSEEEKEQLDKVF
QSVEVSDVVRWIEKMAFILNEMKYSSVPATILEVETIRFLEMPCEMTADVQDLILLQKEL
VRLRERVQMLEQKLQVGALRSAFAQREECDEEVKKEEQHLISSCDVKELPEQLSAQEQDK
VDDINNRFSEIYELLKQRHEASKKALLQEGRVVRFVGQQIYIAYDRAYEFHKNRIDTSET
VQLLSQIFSDCLQETVKVNFLFKDEMKNISEEQKEDIVDVLKQEFPDIPLEVE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagcattgtatcgagtgtatcgcccaaagacttttgacgatatcgtaggacag
gaacacatcacttctgtattaaaaaaccaggttgcagaggatacggtgaaccatgcatat
ttgttttgcggaccgagaggaacaggaaagacttcgacagcaaaggttttggcaagagcg
gtaaactgtacaggagagatcaaaccgtgttatcaatgcaaatcgtgtgaacaatcgtcc
ttagatattattgagatggatgcggcgtcgaacaattctgtagataatattcgtgatatt
cgtgataacattgtgtttatgccgagcgtatcacggtataaggtgtatattatagatgaa
gttcatatgttgtcacaaggtgcattcaatgcattgctcaagacattggaagaaccgccc
agccatgtaatttttattttggctacaaccgaacctcaaaaaatccccgcaacggtactg
tctcgatgtcaacggtttgattttaagaaaatagatgacagtatcttgacacaacagttg
gaaaaagttcttttacaagaggggaaagagtttgaagcagatgcggttcaatgtattgtt
caaaaaagtgatggcggaatgagagatgcactatctcttttggataaggtgatgaatctt
tcgaaattgacaaaacaggaagtgattcaagcattaggagaagttcaagaagaaacctac
cttgcgttcattcagtttatgaaggacaaaaatattccggagttactgtcactgattgaa
caactgaaccaaaacggtctggatatgaaacagtttgttgtagatttgctctattatttg
aaggaaagtttgctcaagatgtggagcgaggaagaaaaagaacagttggacaaagtgttt
caatctgttgaggtttcagatgttgttcgttggattgaaaaaatggcatttattttgaat
gaaatgaaatactcttccgttccggcgacaattttggaagtagagacgattcgttttttg
gaaatgccttgtgagatgacagcggatgtgcaagatttgattctgttgcaaaaagaactt
gtgaggttgagagaacgagtacagatgttggagcaaaaattgcaagtcggagcgttgcgt
tctgcttttgctcaaagagaagaatgtgacgaagaagttaaaaaagaagaacaacatttg
atttcaagttgtgatgtcaaagaattaccggaacagttatctgcacaggagcaagacaag
gtagacgatatcaacaatagattttctgagatatatgaactgctgaaacaacgacatgaa
gcaagcaaaaaagcattgcttcaggaaggaagagtggttcggtttgttggacaacaaatt
tatatcgcttatgacagagcatatgaatttcataagaatcggattgatacatctgaaaca
gtgcaactgttgagtcagattttttcagactgtttacaagagacagtcaaagtaaacttt
ttgttcaaagatgagatgaaaaatatttcagaagaacagaaagaagatattgttgatgtg
ttgaaacaggagtttccggacattcctttggaagtagagtaa
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