Ficedula albicollis (collared flycatcher): 101805691
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Entry
101805691 CDS
T02815
Symbol
NPHP4
Name
(RefSeq) nephrocystin 4
KO
K16478
nephrocystin-4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101805691 (NPHP4)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101805691 (NPHP4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101805691
NCBI-ProteinID:
XP_005057692
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Position
21:3929075..3949186
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AA seq
1338 aa
AA seq
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MGEWERVFRQHLPLPPHPQRRRARPPPRSTAFRCVLKYLHGAALSQGTKYQLRLSLFDAT
YHHFFGKTWRSSWRAASAVPPRSARVTFNEVVYFHTSLNHPGIAAVVEVVMTAGKGDGGS
QHLSCGFGTIPLFHGGSEVTNPATEDRALKLYHGTPRALLHPRFQDPVEKNKYMTVMEQS
HLQYALKSHQPLEAIFHLLPENLLVSGLQTVPGLLPARGDADDCLQKPRLMKTVTCYLER
LFIQLYPSLEEFEEELLDLLNSDRLLQANTAPDGEEVVVRERRLHVGVHNGLRFVRAPQV
AVLVPDVELSPGGCQRVSSSGARDAGQALVLRSRIQLSEMVPHPAFGVCFLLEYVFCSML
RAGGKAVSGSARSEADMRSVRWAVWSPVPSTGDTDVVLPLRGGARRGPCQALVYRTPPSS
RQLQGKHVESGTVQFHVSTDSEEHLVTAAEILCKDRDELKQPPTPSLRVPTPRRAPVSPR
GPGLSVSQLVASPWGTGQTLQQDGGITHLEADLGSPDTEPCANDQLQALPFTPLQLPMAA
VGLQACSSHVSLSRAALARLHAAGFPDILDRNQEPVEISEPVELGGFNLRLEEADPLQGN
EIVLQFLAFGRDAQGSVEGLWPRTVFLTFQFYRFPPVTTPRLQLVGTDGGLAAGLAVPAQ
LLVRVNEDGTLNRQPGLQLKYMVDPAFLRPGEQRWFLRYLAEHSLQIDVWDGDSLLHVGS
AAIKLEPLLRQGQTAVRTYHELEVATTEYEPDGPVLGREALWHGALRPLGVRVALRGRLH
LCLANVGHPCEETPGQLPSHSHIVTSPDSSVITPGGNWCSLNTPGGRRTAWARRLVDVDS
ELEAALRSRRPEQGWPKQHAWDLQVIDAYRDHIKGESIYQMLSQAITATHTVHAVLGTAE
FFEFALKNPYSIQHTVTIEVDHPELSVILDPREWRHFKELTKSVTPVEEDMFHLRDDLKP
QVYLRPSETVHIPFKYQTFSADPAVVAAQGPAGLGTRANESSHSLGKSGAKQTKLIQVSF
QVSRGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGTPVGVPGGQP
EMFVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSPQIKKFFVAIYMDTWLAAPVQIWQF
YLHSLQRLDVSCTAGQLTRLSLLLRGTAAPRRVQAFTSHPQELEVDPNGAFLLPANGIQD
LYIGVRPRRAGSRFIYLNLVDVESHQLVSSWLLCLSCRQPLISKVFEISLPAGGGKGCNK
RITYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQTVGEEEILIHI
NDHEDKNEETFCVKVLYQ
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtgggagcgggtgttccggcagcacctgccgctgccgccgcacccgcagcgg
cgccgggcccggcccccgccccgctccaccgccttccgctgcgtcctcaagtacctgcac
ggcgctgccctctcccagggaaccaagtaccagctgcgcctctccctcttcgatgccacc
taccaccacttctttgggaagacgtggaggagcagctggcgagctgccagcgctgtccca
ccgcgctcagccagggtgaccttcaatgaggtcgtttatttccacacctccttgaaccac
cctggcattgctgccgtcgtggaagtggtaatgacagctgggaaaggggatgggggctct
cagcatctttcctgtggctttggaaccatccccctctttcatggcggatcagaggtgaca
aacccggccactgaggacagagcgctgaagctgtaccatgggacaccacgtgcccttctg
cacccacgcttccaggaccctgtggaaaagaacaaatacatgacagtgatggagcagagc
cacctgcagtatgccctgaaatcccaccagcccctggaggcgatatttcacctccttcct
gaaaacctgctggtatctgggctgcagactgttcctggtttgctgccagcacgtggagac
gcagatgactgcttgcagaagccccggctgatgaagacggtcacctgctatctggagcgg
cttttcatccagttgtacccttccttggaggagtttgaggaggagctgttggatttactg
aacagtgatcgcttacttcaggctaacactgcaccagatggtgaagaggtggtggttcgg
gagcggcggctgcacgttggtgtccacaatggcctgcgctttgtccgggcaccgcaggtc
gccgtgctggtgccagacgtggaattgtcaccaggtggctgccagagggtgtccagctct
ggagccagggatgcaggtcaagccctggtgctgaggagccgcatccagctgagtgaaatg
gttcctcatccggcttttggggtctgcttcctgctggaatatgtcttctgcagcatgctg
agagctggtgggaaggctgtgtcgggcagtgcccgcagtgaggccgacatgcgctcggtg
cgctgggccgtctggagccctgtccccagcaccggcgacacagacgtggtcctgcccctg
cgtggtggcgctcgccgtggcccctgccaagccttggtgtaccggaccccacccagctcc
cggcagcttcaggggaagcacgtggagtctgggactgtccaattccatgtttccactgat
tcggaagaacatcttgtaactgctgcggagatcctatgtaaagacagggacgagttgaag
cagcctcctacgccatcgctgagagtgccaaccccacggcgagcaccagtctccccacgg
ggaccagggctgtcggtgtcccagctcgtggcctccccatggggcacaggccagaccctg
cagcaggatgggggcatcacccacctggaggccgacctgggctcgccggacacagagccc
tgtgccaacgaccagctgcaggcgctgcccttcacccctctgcagctgcccatggctgct
gtggggctgcaggcatgcagttcccatgtgtccctctctcgtgctgccctggcacgcctg
cacgctgctggctttccagacatcctggaccgcaaccaggagccagtggaaatctcggag
ccagtggaactgggcggtttcaacctgcggctggaggaagctgaccctctgcaaggcaat
gaaatagtcctgcagttcctggcttttggcagggatgcccagggcagtgtggaggggctg
tggccgaggactgtcttcctcaccttccagttctaccgtttcccaccagtcaccacaccc
cggctgcagctggtcggcacagacggggggctggcagccgggctggctgtgcctgcgcag
ctccttgtccgtgtcaacgaggatgggaccctaaacagacaaccgggcttgcagctgaag
tacatggtggatccagctttcctgcggcccggggagcagcgctggttcctgcggtacctg
gcagagcacagtctccagattgacgtctgggatggagactccctgctccatgttgggtct
gctgccattaaactggagcccctgctgcgccagggccagacggccgtcaggacctaccac
gagctggaggtggccacgaccgagtacgagccggacgggccggtgctgggccgggaggcg
ctgtggcacggcgccctgcggcccctcggtgtccgtgtggctctgaggggccgcctccac
ctctgcctggccaatgttggtcacccatgtgaggagaccccagggcagcttccatcccac
tcccacattgtcacttcaccagacagttctgtcatcaccccaggtggtaactggtgctcc
ctgaacactcctggaggcaggcggacggcgtgggcacggaggctggtggatgtggacagc
gagctggaggcagcactgcgcagccgccggccagaacagggctggccaaagcagcatgcc
tgggacctgcaggtcattgatgcctaccgggatcacatcaagggagagagcatctaccag
atgctcagtcaggccatcacagccacccacactgtccatgctgtgctgggcacagctgag
ttctttgagttcgccctgaagaatccatacagcattcagcacactgtgaccattgaggtc
gaccaccctgagctcagtgtcatactggacccaagggagtggcgtcacttcaaggagctg
accaagagtgttacaccggtggaagaggatatgttccatctccgtgatgacctcaagcct
caggtctacctgcgccccagtgagactgtccacatccccttcaaataccagaccttctct
gcagaccccgccgtggttgcggcacaggggccggctgggctgggcaccagggccaatgag
agcagtcactcccttgggaagagtggggccaagcagacaaagctcatccaggtctccttc
caggtgagcagggggaagcccattgcactcctgcgggtgaaggtggagccacagccccat
gtggtggaccagaccttccgcttctaccacccagagctgaccttcctgaagaaaaccatc
cggctgcctccttggcacaccctccctggcacaccagtgggggtgccaggtgggcagcca
gagatgttcgttcgctgcagcgaccccgacatcatttgtgaaaccaaatccttggggcct
ggtgagccacaggacatcttcctcaaagtagctggaggaccaagcccgcagatcaaaaag
ttttttgtcgctatttatatggacacctggctggcagcacctgtccagatctggcagttc
tacctgcactcgctgcagcgcctggacgtctcctgcacagccgggcagctcacccgcctc
tccctgctgctgcgtggcaccgcggccccacggagggtgcaagccttcacctcccacccc
caggagctggaggtggatccaaacggtgccttcctcctccccgccaatggcattcaggac
ctgtacatcggcgtgaggccacggcgggctgggagcaggttcatctacctcaacctggtg
gatgtggagtcccaccagctggtgtcctcctggctgctctgcctgtcctgcaggcagcct
ctcatctccaaggtctttgagatctcgctgcctgcgggaggtgggaaaggctgcaacaag
cgcatcacctacaccaacccctacccctcgccccggctctacttcctgtgcaccaaccgc
cccgacctgctgcagttcaaggaggattccttcgaggtggctggaggggaggtgtacacc
atcggcctgcgcttcgccccgagccagactgtgggcgaggaggaaatcctgattcacatc
aatgaccacgaggacaagaacgaggagaccttctgtgtgaaggtcctgtaccagtga
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