Ficedula albicollis (collared flycatcher): 101805743
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Entry
101805743 CDS
T02815
Symbol
USP13
Name
(RefSeq) ubiquitin specific peptidase 13 (isopeptidase T-3)
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101805743 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101805743 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fab04147
]
101805743 (USP13)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101805743 (USP13)
Peptidases and inhibitors [BR:
fab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101805743 (USP13)
Ubiquitin system [BR:
fab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101805743 (USP13)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101805743 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP
zf-UBP_var
UCH_1
UBA_4
UBA_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
101805743
NCBI-ProteinID:
XP_016156203
UniProt:
U3K0Z6
LinkDB
All DBs
Position
9:complement(19562470..19599639)
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AA seq
801 aa
AA seq
DB search
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEISSD
LNNDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQESDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPLKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKEELIAYELKRREAEAARRPLPELVRAKIPFRACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMANHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVTPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALDWIFSHPDPEEESDLALDTMDMEN
NANANILADTGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtttctgggatttggaagggagcacatcgagaggcattaccggaaaacagga
cagtgtgtctatctgcacctgaaacgacacgtgatagagaaggtaccaggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacaacgatgactttgagtatgaggatgaagcaaaacttgttatctttcctgatcac
tatgaaatctcattacccaacatagaagagctaccagcactggtgacgatagcttgtgat
gcactcctcagtgcaaaatcaccctacaggaagcaggaatctgactcctgggaagaagag
ctgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattccc
cccagtgggtggaagtgctccaagtgtgacctgcgggagaacctgtggctgaacctgacc
gatggctctgtgctctgtgggaagtggttcttcgatggcagtgggggcaatggacacgcc
atggagcactacaaggagacaggttatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccgcatatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggctg
agagataatgacataaagccaagagtctcagaatgggaagtgattcaggaagctggcgtg
aagctcaagcccatgtatggcccaggatacactggcatgaagaacctgggaaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaacact
cagatggctaaactggggcacggcctcctttcaggccaatattctaagccacccttgaaa
tctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagaattttcatctaacagacaa
caggacgcacaggagtttttcctacatcttataaatctagtagagaggaaccctgtgggt
tcagaaaaccccagtgatgtgttccggttcctggtggaggagcgcacgcagtgctgccag
tccaggaaggtgcgctacacggagagggtggactacatcatgcagctgcccgtggccatg
gaggcagcaacaaacaaagaggaattaattgcctatgaattgaagaggagagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagagcatgtctg
caggccttttctgaaccaagcaatgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacctagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctatagacatg
ccagatttcctggatatcagtcaccttcgggccagggggctccagccaggagaagaggag
ctcccagacattgctcctcccattgtcattcctgatgacccaaaagatcacatggcgaac
catttcgtggagtccctagatattgatgagtcctcagttatgcagctggcagagatgggc
tttcctttggaagcatgtcggaaagctgtgtactatacaggcaacctgggtgctgaagtt
gctttcaactggatcattgcacacatggaagaaccagacttcgctgagccattggtcaca
cctgcatttggagaagttgcttccagtggggcagctgctttaggagctgtagggctagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcgattcaggcactgaaggcaacaaacaataacttggagcgtgcactggattggatcttt
agccaccctgaccctgaggaagaaagtgaccttgctttggacacgatggatatggagaac
aatgctaatgccaatatccttgcagacacagggtctgagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacgatgagtggc
cactacgtttgtcacctcagaaaggaaggaagatgggttatctacaacgaccttagagtt
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccataggataccg
agttag
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