Ficedula albicollis (collared flycatcher): 101805752
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Entry
101805752 CDS
T02815
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101805752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fab03009
]
101805752
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
RNases
101805752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Na_H_antiport_3
EzrA
Motif
Other DBs
NCBI-GeneID:
101805752
NCBI-ProteinID:
XP_016157539
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Position
14:complement(15356328..15368215)
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AA seq
743 aa
AA seq
DB search
LPAFPFPQEKSCHLSAALLGEDSEISQDQLYELLKYAALGKCHNAAQPSWCRIYHQSHLA
GVVVVVLHEMSQLHFYRFYLQFKHLRKVFQHRFTLSPSANFPVSLYGEGTNLKPQNTPQG
LTSTSSECITKNSDLQCDPIIQRYGAKKQGLTSYTLTLEEQEKHGYPIEGSPRSKGYIST
ECDQQRTDSSPLFGLDCEMCVTAKGNEVTRVSLVDAQGQCLLNELVKPESRVMNYCTRFS
GVTKKMLLPVKTRLSDIQTRLKKMLPHDAVLVGHSLNFDLQALEMIHPSVIDTSLLFARS
EGRRFKLKFLAKAVLGKEIQCEQKLGHDPTEDARAALELAQFFIEQGPTKVAELNLEMLL
TAEKLAELSENKAALQPQGCGFQEQLNEPPPSSKPCFLDCLQVTGQKPLLLGRQGLDSSG
LCQSNLSTSNKQILQRALEDVPLSKFSIIQFSLGPEYLASHLHAGLYEKVRSKLTDMLTI
YAGPFEENFCMKSVKKEFGRCGPIQSLTVVTETFQPYVCIQYEVLEAAQLAVESLNGAEV
AGSCIKVQRPVTAAMLDCNVLIEELELDVENEGVIYVAGLKNSLTETDLQEEFSQLKDLE
TLFLPKDLQSGKHRNCCFLKFQKTQSAVDALGAINGWTMRGSVLRSRNALAPGHLWRWIW
RMNHSSGNQGKHIFYEKVEQLTDSEQDLRKKMKKLDHHIKKLYRSLQNNTLCIVLFPGVN
SMHGSQSGLGLMGIKDDEGRSAC
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttaccagcatttccctttccacaggaaaagtcgtgtcatttgtcagcagccctgcttggc
gaggactctgaaatcagccaggaccagctgtatgagctgctgaaatatgcagctctgggg
aaatgccacaatgcagcacagcccagctggtgccgtatttatcaccaaagccacctggct
ggagttgtggttgttgttctacacgaaatgagccaactccatttctacagattctattta
cagttcaaacacctcaggaaagtattccagcatagattcacattatcaccttctgctaac
ttcccagtcagcctgtatggagaaggaacaaacctgaagcctcaaaacactccacaaggc
ttgacttccaccagcagtgaatgcattaccaagaactcagacttgcaatgtgatcccatc
attcagagatatggagcaaaaaaacaaggccttacaagctatactctaactttagaagag
caggagaaacatggctatcccatagaaggttcccccagatccaagggctacatttccaca
gagtgtgatcagcagaggacagacagcagccccctcttcggtctggattgtgaaatgtgt
gtgactgccaaagggaacgaggtcacccgcgtgtctctggtggatgcccagggccagtgc
ctcctgaatgaactggtcaaacctgagagcagagtgatgaactactgcaccagattctca
ggagtcacaaagaaaatgcttcttccagtgaagacaagactgtcagacatccaaaccagg
ctaaaaaaaatgcttccccatgatgcagtattggtgggccattctttaaattttgatctt
caggctttggaaatgatccaccccagtgtaattgatacttcactgctttttgccagaagt
gaaggtcgaagatttaagctaaaatttctagccaaagctgttttagggaaggagattcag
tgtgaacagaagcttgggcatgatcctacagaagatgctagagctgctttggaattagct
caattcttcattgagcaaggacccacaaaggtagcagaactaaacttggagatgcttctg
acagctgaaaaactggctgagctctcagagaacaaagctgcactacagccacaaggatgt
gggttccaggaacagctgaatgagcctccaccatcatccaaaccatgttttttagattgt
ctgcaagtgactggccaaaaacccctcctcttgggcagacagggattagactcttctggc
ctgtgtcagagtaacctgagcacttcaaacaaacagattcttcagagagccttggaagat
gttcccctgtccaagttcagtatcattcagttcagtttgggtccagagtatcttgcatct
caccttcatgctggactttatgaaaaggtgagaagcaagctgactgacatgctgacaatt
tacgcaggtccttttgaagagaacttttgcatgaagtctgtgaagaaagaatttgggagg
tgtggaccaatccagtcccttacagtggtaactgaaacattccagccctatgtctgtatc
cagtatgaagtgctggaagctgcccagcttgcagtggaaagcctgaatggagctgaggta
gcaggatcctgcattaaggtccagagaccagtcactgcagcaatgctggactgcaacgtt
ctgattgaggaactagaactggatgtagaaaatgaaggtgtgatttatgtggctggtcta
aagaattcattaacagagacagacttgcaagaagaattcagccagctgaaagacctggaa
acactgttcctgccaaaggatcttcagagtggaaagcacaggaactgctgtttcctcaaa
ttccagaaaacccagagtgctgtggatgcccttggagctataaatggatggaccatgagg
ggtagtgtgttaagaagtaggaatgcccttgctccaggtcacctctggagatggatttgg
cgaatgaaccacagcagtgggaatcaaggaaaacacatcttctatgagaaagtggagcag
ctgactgactctgagcaggatctaaggaaaaagatgaagaagttagaccaccatatcaaa
aagctttatagaagcctgcagaacaacaccctctgcattgttctgttccctggagtgaac
agcatgcatggatcacaatccggccttggtctgatgggaataaaagatgatgaagggagg
agtgcttgttaa
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