KEGG   Ficedula albicollis (collared flycatcher): 101805849
Entry
101805849         CDS       T02815                                 
Symbol
LARP1B
Name
(RefSeq) La ribonucleoprotein domain family member 1B
  KO
K18757  la-related protein 1
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fab03019]
    101805849 (LARP1B)
Messenger RNA biogenesis [BR:fab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101805849 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La Vault SGP
Other DBs
NCBI-GeneID: 101805849
NCBI-ProteinID: XP_005044712
LinkDB
Position
4:5956406..5984846
AA seq 1066 aa
MFSRACRTCSRGRVPGSALRTEETRTSSRSPYRRAGAGEACRAEMSERAWKACRPREVTA
HGRAPGPSPARAGPRQRARSAARPSAAQVAEEGGRSREAPAPKENAWTRRRARRDSPSPP
AGPDGRLGPQEPELQNSTKVIKAGKPRSRKSSKADDLGDIASWPTPSEIANNESKTVSHS
KKPTNRREKEEKSDQKSNNGIKDNPEAKPNGPADNTSEDEAQTNNQRKKGNKQKWVPLHL
DDVRSDNQDRARTSSRFMLETNKLIPHNNRRNEARNWRRDREKRDDHDEVCSVRSEGGSV
RGFSRGRGRGRSRGRGRGRGNPSMNFDYSVGYQELYGEGIDQVFHPELNPGVIYYYGDGT
GVQMYSVDEALLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALT
TNAALILEALKDSTEVETVDQKLRKRVDPEKWPIPGPPPCNLPPTDFSQLINCPEFIPGQ
TFGSHTESAPSSPRVGSPLSPKENAESSNFQTMCKGLSTSLPDLDSEHWIEVKKRHRAST
VKLKETVSVTDQTPDQHQPPPPLEEQEQEELEFLFDEEMEQNQCRKNKFTDWSDSDSDYE
IDDQDINKILIVTQTPPYVKKHPCGDRAGNRVCRAKITSELAKVINDGLYYYEQDLWMDQ
SENDAMMKQEIENFKKLSLINKDEFVGLAPETADPTQEVPPRPPGLQKTEELARHFLSTE
VPPTAGMARSLPTAVPDSPHFHPGFIPRTPRTPRLQNPNKTPRFYPVVKEARSFDVKTPR
KRKTRHSTNPPLECHVGWVMDSRDHRPRTSSVSSSNASPSEGAPLAGYGCTPNSLPKFQH
PSHELLKENGFTQQVYHKYRRRCLTERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEE
FKQLALEDAKEHYRYGLECLFRFYSYGLEKKFRKEIFEDFQQETKRDYEAGQLYGLEKFW
AYLKYSQHKTPAVDPKLQEYLSKFKRLEDFRVDPPLGEESGRRRPGEDSGHRRHQPNSSK
TLSTTKPAAACQSQALGSVSCGNTVQASADRSNAATKSIESDVPEK
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgttctcacgcgcctgtcgaacttgttcccgaggccgtgtcccggggagcgccctccgc
accgaggagacgcgcacatcctcccgctcaccatatcgccgtgcaggtgcgggcgaggcc
tgcagagccgaaatgtccgaaagggcctggaaagcctgccggccgcgtgaggtcacggcg
cacgggagagccccgggtccctcccccgcgcgggcggggccgaggcagcgcgcccggagc
gccgcccgtccctccgcagcccaggtggcggaggagggcggccggagcagggaagccccg
gcgcccaaggagaacgcgtggacgcggcgcagagcccggcgggacagcccttccccgccc
gcggggccggacgggcggctcggaccgcaggagccagagctacaaaattccactaaagtg
ataaaagcaggaaaacccaggtcaagaaaaagcagcaaggctgatgatttgggtgatatc
gcaagctggccgaccccaagcgaaatagcaaacaatgaaagtaagactgtaagtcatagt
aagaagccaacaaatagaagagaaaaggaggagaaatctgatcaaaaaagcaataatgga
atcaaggacaatcccgaggcaaagccaaatggtccagcagataacactagtgaagatgaa
gctcaaactaataaccaaaggaaaaaaggtaacaagcagaaatgggtgccgcttcacttg
gacgacgtgaggtcggacaatcaagacagagctcgaacgagctccagattcatgctggaa
acaaacaagttaatacctcataacaacaggaggaatgaggcaagaaactggcgtcgtgat
agagagaagagagacgaccatgacgaggtgtgcagcgtgaggagtgagggcggcagcgtc
cgagggttctccagaggcagaggaagggggagaagcagaggaagaggacgaggcagagga
aaccccagcatgaactttgactattcagttggttatcaagaactgtatggtgaaggaatt
gaccaagtatttcatcctgaacttaaccctggtgtgatttattactatggtgatggaaca
ggagtgcagatgtattctgtggacgaagcacttctcaaggaatatataaaacatcaaatt
gagtattatttcagcacagaaaatttggagagagacttctttctgaggaggaagatggac
caacaaggatttttacctgtgtcactgattgccagtttccgtcggatgcaagctctgact
acgaatgctgcactcattttggaggcccttaaggacagtacagaagttgaaactgtggat
cagaaactaagaaaaagagttgatccagaaaagtggccaattccaggtcctcctccatgc
aacctgcctccaactgatttttctcagctcatcaattgtccagaattcataccaggccaa
acttttggctcacatactgagtctgcaccaagttctccaagagtgggaagcccactgagt
ccaaaggaaaatgctgaatcaagtaattttcagacaatgtgtaaaggactgtctacaagt
ttgcctgatctggactctgaacattggatagaagtgaagaagaggcatcgtgcatccact
gtcaagctaaaggagactgtttctgtaactgatcaaacaccggatcaacaccagccaccc
ccacctctggaggaacaagaacaggaagaacttgaatttttgtttgatgaagagatggaa
caaaatcagtgtcggaagaataaatttactgattggtcagatagcgattctgattatgaa
attgatgatcaggatataaacaagattttaattgtaacacagacaccaccatatgtgaaa
aaacatccttgtggagaccgtgctggcaaccgtgtgtgccgtgcaaaaattacatcagaa
cttgctaaagtcattaatgatggcttgtactactatgagcaggatttgtggatggatcag
agtgaaaatgatgccatgatgaagcaagagattgagaactttaagaagctaagcctcatt
aataaggacgaatttgttggtcttgcaccagaaactgccgatccaacccaagaagttcct
ccaagacctccagggttacagaaaacagaggagctggcccgtcatttcctgagtactgaa
gttcctccaacagcaggaatggctcgatcactgccaacagcagtcccagattccccccat
ttccaccctggcttcatcccacgaacacctcgcaccccaaggctccagaatcccaacaaa
acacccaggttctaccctgttgttaaagaagcacgatcctttgatgtaaagaccccaaga
aaaagaaaaacacgccacagtacaaatcctcccttggaatgccatgttggttgggtgatg
gattccagagaccacaggccaagaacttcctctgtgagcagttccaatgcctcaccttca
gaaggagctccactggcaggttatggctgtactccaaattctcttcccaaattccagcac
ccatctcatgaactgttaaaggaaaatggctttactcagcaggtgtaccacaaataccgg
cggaggtgtttaacagagaggaaacggttgggaattggccagtcccaagaaatgaacaca
ctttttcgtttctggtccttttttctgagagatcacttcaacaagaaaatgtatgaagaa
ttcaaacagcttgctctagaggatgcaaaagaacactacagatacggcttggaatgcttg
ttcagattttacagctatggcctggaaaaaaaattcaggaaagaaatattcgaggatttc
caacaagaaacaaagagggactatgaagctggtcagctgtatggactggaaaaattttgg
gcttacctaaaatactctcagcacaagacgccagccgttgaccccaaactgcaagaatac
ttgagtaaatttaagagactggaggacttcagggtggatcctcctcttggtgaagaatct
ggcaggaggagaccaggtgaggattcaggtcatcgcagacatcagcccaactcttctaaa
acactttccaccaccaaacctgctgctgcctgtcagtcccaggcgctgggaagcgtttcc
tgtgggaatactgtgcaagcctctgcagaccgtagcaatgctgccacaaaatctatagaa
agtgatgtaccagaaaaatag

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