Ficedula albicollis (collared flycatcher): 101805906
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Entry
101805906 CDS
T02815
Symbol
FREM2
Name
(RefSeq) FRAS1 related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101805906 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
fab04091
]
101805906 (FREM2)
Lectins [BR:
fab04091
]
C-Type lectins
Lecticans
101805906 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Frem_N
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
101805906
NCBI-ProteinID:
XP_016151669
LinkDB
All DBs
Position
1:complement(68214451..68336995)
Genome browser
AA seq
3082 aa
AA seq
DB search
DLVLQVQPGDRCHLTVLDEDPLWQRPGRLSPRRFPCDFGAREVQYSHLGGRSPARDRVRL
QLRYDSPSRALVLPLVLEVEVLFTQLEIVIRNLPLTVERLRGTSNPLDARSLEFAFEPGR
QRCRVGGGGGGGAAAAGGGGQAAGGGPMPAVMWDCEEFLRLGLRYRHTAAGGSPNRDLVP
LVAELREAAGGGALLKREYFQVLVRIRAGTENVAPKPSFLAMLMMEVDQFVLTALTPDML
SAEDAESPPDLLLFNITSPFGPGQGHMVSTDDRSLPVTSFSQRDVRELRIAYQPPVEDSD
RERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAPVVTRNTGLVLYEGQSRPLSGPGPS
PNLVVSDEDDLEQVRVSVVAGLRHGHLTLLEDTPGPAAPRKHFTVAELAAGRVIYQHDGS
ESPLSDNLVLRLEDGGSRHRVEFLFPITLVPTDDQPPLLNANTGLAMAEGETVPITTRAL
SATDIDSQDAILLFTVESGPTAGQLLLRQAQPPPGWEEEEEEEGFSWRKVPGVAGSSPIY
EKPVREWLQQDIVEGRLFYHHFGAHSPGPGVVLDQFIFRVQDDNDPPNRSGPQTFVIRVH
PVDRLAPELHSSSSLHLVVAEQQVTPLRRKHLCYTDQDSGDRELRYTVIQPPTDTDSNHP
PDAFGARLGSLVLTEDHSVEVTHFTQAQINHHKISYRPPQQELGVAPHLIQFQYQVQDAA
GNAARGTFTIYLQPVDNQPPEITNTGFTLPEGGSHVISPTELDASDTDTELARLRFILTQ
APRYGQLQLSGYSLVPGGIFGLEDIRQGRVVYVHSGAETSSDTCRLDVSDGVHFVPITLK
MSVHPVDDEVPTLRLPPGTLGSYLDVLENGAAEITASVIQGTDEDTDDFMLTFIVEDPPQ
HGSILVQGVPAERFSQRDLLDGAVVYAHTGGEIGLLPKEDAFNLTLSDLSEKWRVRGNVV
HGVSVLVTILPVDSQAPEIFVGEQFVVTEGDKRVITLAHLRAEDVDTPSDDILCTIVAQP
TSGYVENISPAPGSEKSRAGIAISAFTLKDLRQGHIFYVQSIHKGVEPVEDRFALRCSDG
VNFSQRHFFPIVVVPINDEEPEIFLREFVVMEGMSLVIDTPILNAVDADVPADELTFTIT
RLPRHGHIVNQLVNGTVLVESFTLDQITESSNILYEHDDSETRADSFEVQLTDGRHTIRK
MVPIMVIPVDDETPRMAINDGLEIEMGETRTINNRILKATDLDSEDKTLAYVVSYGPGQG
LLQRIKPSGEVENITLGMNFTQDEVDRNLIRYVHFGQQGVRDLIKFDVTDGINPLIDRYF
YVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDENLVFTITRPPVRGHLE
CTDQPGVPISTFTQLLLAGNKVYYIHTSEDEVKMDSFEFEVTDGYNPVFRTFRISISDVD
NKKPVVTIHNLVVSENEYRLITPFELTAEDRDTPDALLKFIITQIPVHGQIMFNNSRPVT
TFTKQDLNENLISYKHDGSESVEDSFSFTVTDGTHTDFYVFPNTVFETRKPQTMKIRIMA
VDNSIPQVVINKGAQTLRVLATGHIGFLITNKVLRVEDRDSLHVTLKFRITEGPRHGFLI
HLGKGNHSISQFTQADIDDMKICYVLRGGDNATSDIFHFLVEDGGGNKLKNQHFRLNWAW
ISLEKEYYLVNEDSKYLDVVLKRRGYLGETSFISISTKDGTAKKDKDFRGKAQKQVQFNP
GQTLATWRVRILSDGEHEHSESFQIVLSEPVMAILEFPAASTVEIIDPGDESTVFIPQST
YTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGTAPTSVLSYSDYISRPEDHNSIL
RFDKDEREKTCRIVIIDDSLYEEAETFDVLLSMPMGGRIGAEFPSTRITIVPDKDDEPAF
YFGDDEYYVDESAGYVEVRVCRTGTDLSKAASVTVRSRKSEPLTAEAGVDYVGISRNLDF
SPGVNMQTFRVIILDDLGQPVLEGAEKFELVLRMPMNAALGEPSKTTIFINDSVSDLPKM
QFKESVYVGNENDGQVSAMIYRSGDIRYTSTVRCYTRQGSAQVMMDFEERPNTDSSIITF
LPGETEKPCTLVLADDTFHEEEEELRLVLGTPRSDSSFGASVGEQNETLIKIRDDADKAI
IKFGETKFSVSEPKDARQVATVKIPVLRLGDTSKVSVVRVHTKDGSATSGEDYHPISEEI
EFKEGEAQHFVEIEVLFDGVREMREAFTVHLKPDENMVAEIQTAKAIVYIEEMNSMADVT
FPSVPQVASLLIYDDTSKAKDKTSPIAGYPVICITACNPKYEDFEKTGSICASENINNTL
TQYRWLVSAPAGPDGVTSPMKEVDFDTFFTSSKMITLDSIYFQAGSRVQCAARAVNSDGN
EGLELMSPIVTISTSEGLCQPRISGVVGAEPFSAKLRYTGPEDPEYANLIKLTVTMPHID
GMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTEVKTHHGFLTDATKNPDVIGETI
PYQYSPTMRGFNTLRFYRNLNLEACLWEFVSYYDMSELLTDCGGTIGTDGQVLNLVQSYV
TLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAILWKDGIGSPPEAELQGSLFP
TSMRISEEGRLVVNFKTEARFHGLFVMSHPASSLTSMVMSADHPGLTFSLSLIRSEPTYN
LPVQQWSFVSDFAVRDYSGMYTVKLIACTTAPHQEYSLPVICNPREPITFDLDIRFQQVS
DPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAFSEGDVIYGRVMVDPVQNLGDSF
YCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLYRFKIVDKAQPETQATSFGNILF
NAKLAIDDPEAIPLVKQPGSDGFKVDSTPLFQVSLGREWYVHTIYTVRSKENANRGIGKR
SVEQQYHSLLSAASPGASPRRRQRRGVQRAPELARDIGAENNRGTNIQHIALDRTGKKQV
PQREVALNGVLPRELNNQSAGTSLVTIIGGAAAIFLAICLIAIIVLLLKWKQNSDKKEST
NESGSNEPMMLPHNYSNDSSEV
NT seq
9249 nt
NT seq
+upstream
nt +downstream
nt
gacctggtgctgcaggtgcagccgggtgaccggtgccacctcaccgtgctggacgaggac
ccgctgtggcagcgcccgggccgcctgagcccccggcgcttcccctgcgacttcggagcc
cgcgaggtgcagtactcgcacctgggcggccgcagccccgcccgggaccgcgtccgcctg
cagctgcgctacgactcgccgagccgcgccctggtgctgcccctggtgctggaggtggag
gtgctcttcacccagctggagatcgtcatccgcaacctgcccctcaccgtggagcgcctg
cggggcaccagcaacccgctggacgcccgcagcctggagttcgccttcgagcccggccgg
cagcgctgccgggtgggggggggggggggggggggggcggccgcggcgggcgggggcggg
caagcggcggggggcggcccgatgccggccgtgatgtgggactgcgaggagttcctgcgg
ctggggctgcgctaccggcacacggccgccggcggctccccgaaccgcgacctggtgccg
ctggtggccgagctgcgggaggcggcgggcggcggggcgctgctgaagcgggagtacttc
caggtgctggtgcgcatccgcgccgggaccgagaacgtggcccccaaacccagcttcttg
gccatgctcatgatggaggtggaccagttcgtgctcaccgccctcacccctgacatgctg
tcagctgaggatgcagagtcaccgcccgatctactgctcttcaacatcacctctcccttt
ggtcctggccaaggccacatggtcagcacagacgaccggagcttgcctgtcacctccttc
agccagcgggatgtgcgggagctgcgcattgcctaccagccgcccgtggaggactctgat
cgggagcggctctttgagcttgagctggaagtgttggacccagagggtgctgcctcagag
ccctttgccttcgtgattgtggtgaagcccatgaacaccctggcccctgtggtgacccgc
aacactggcctcgtgctctacgaggggcagtcaaggcctctctcaggcccgggtcccagc
cccaacctggtggtcagtgatgaggatgaccttgagcaggtgcgggtgagtgtggtggca
gggctgaggcatggccacctcactctcctggaggacaccccaggacctgctgcccctcgt
aaacacttcacggtggccgagctggcagcaggccgagtcatttaccagcacgacggcagc
gagtctccactcagtgacaacctcgtgctgcggctggaagatggtggctctcgccaccgc
gttgagttccttttccccattaccctggtgcccactgatgaccagccacccctactaaat
gctaacacagggcttgccatggctgagggggaaacagtgcccatcaccacccgtgctctt
agcgccactgacattgactcgcaggatgccatcctgctcttcacagtggagtctggcccc
acggctgggcagctcctgctccgccaagcacaaccacctcctggctgggaagaggaggag
gaagaggagggcttttcttggaggaaggtgccaggtgtagcagggagctcccccatctat
gaaaagccagtgagagagtggctgcaacaggatattgtggaagggcgtctcttttaccac
cactttggggctcacagccctggccctggggttgtgttggaccagttcatctttagagtc
caggatgacaatgacccacccaaccgctctggaccacagacttttgtgatcagggtacat
cctgtagacagattagccccagagctccatagtagcagcagcctgcatttggtagttgca
gagcagcaggtgaccccactgcggaggaagcacttgtgctacacagatcaggactcgggg
gaccgcgagcttcgctacacggtaatccagccccccactgacacggactccaaccaccct
cccgacgcctttggagcgcgccttggatccctggtgctgactgaggatcactctgtggaa
gttacacacttcacccaagcccagatcaaccatcacaagatctcgtaccgccccccacag
caagagctgggcgtggcccctcatttgattcagttccagtatcaagtgcaagatgctgct
ggcaatgcagccagagggactttcaccatctacctgcagcctgtggataaccagcctcct
gaaatcactaatactggcttcactttgcctgagggaggcagccatgtcattagtccaact
gagctggatgccagtgacacggacactgaacttgcccgtctcaggtttatcctgacccag
gctcctcggtatggccagttgcagctctctgggtacagtctggttcctggaggaatcttt
ggcctggaggatatcaggcaagggagggtggtgtatgtgcacagtggagctgagaccagc
agtgatacctgcaggcttgatgtgagtgatggggttcattttgtgcccatcacactaaaa
atgagtgtgcacccagttgatgatgaggttcctacgctgcgattgcccccaggcacgctt
ggttcctacctggacgtgctggagaacggtgctgctgaaatcactgctagtgtcattcag
ggcacagatgaggatacagatgactttatgttgaccttcattgtggaggatcctcctcag
catgggagcatcctggttcaaggggtgcctgcagagaggttctcccagagagatctgctc
gatggtgctgtggtatatgctcacactggtggcgaaataggccttctgcccaaggaggat
gctttcaaccttaccttgtctgacctctcagagaagtggcgtgtcaggggcaatgttgtt
catggagtttcagtcttggtgaccattcttcctgttgacagtcaagctccagagattttt
gtgggggagcagttcgtggtgacggaaggtgacaaacgggtcattactcttgctcacctc
agggctgaagatgtggatactcctagcgatgatatactatgcacaattgttgctcagccc
acatctgggtatgtagagaacatctctcctgccccaggatctgaaaaatccagggcaggt
atagctataagtgcttttaccttgaaggacctccgtcaagggcatattttttatgtccag
agtatacataagggtgtagagcctgttgaagacagatttgctttgcgctgttctgatggc
gttaacttttcccagaggcacttcttccccattgttgttgtgccaatcaatgacgaagag
cctgaaatcttcctgcgagagtttgttgtgatggaaggcatgagcctggttattgatacc
cctatcctcaatgcagttgatgcggatgtccctgcggatgagttaacgttcacgatcacc
aggctacccaggcacggccacattgtgaaccagctggtcaatggaactgtcctggtggag
agcttcaccttggatcagataacagagagctccaacattctatacgaacatgatgactct
gagacaagggcagacagttttgaggtgcaactcacagacggtagacacaccattaggaag
atggtacccatcatggttattcctgtagatgatgagacacccagaatggccatcaatgat
ggtttggagattgagatgggggaaactagaactattaataacagaatattgaaggctact
gatcttgattctgaagacaaaaccttggcatacgttgtaagttacgggccaggacaaggc
ctcttacagagaataaagccttcaggtgaagttgaaaatatcacccttggaatgaacttc
acccaagatgaagtggatagaaatttgattcgatatgtgcattttggccaacaaggagtt
cgtgatcttatcaagtttgatgtgacagatggaataaatcctcttattgaccgctacttt
tatgtgacgataggcagcattgatattgtcttcccagatgtcatcagcaaaggagtttct
ctgaaggaaggagggaaggtaaccctgactactgatttgcttagtaccagtgacctgaat
agtcctgatgagaacttggttttcaccattacccgaccacctgttcgtggtcatcttgaa
tgcacagatcagcctggggtgcccatctccactttcactcaactcctgttagcaggcaac
aaagtctattacattcacacttcagaagacgaagtgaaaatggacagctttgagtttgag
gtgactgatggctataaccctgtgtttcgtactttcagaatttctatcagtgatgtggac
aataagaaacctgttgtcacaatccataacctggtggtgagtgaaaatgaatacagactg
ataaccccatttgaactgactgcagaagacagagacacacctgatgcactgctaaaattt
atcatcactcaaataccagttcatggccagatcatgttcaataactccagaccagtcact
accttcactaaacaagatctgaacgaaaatctaatcagctacaaacatgatggctcagaa
tcagttgaggacagtttctctttcactgttacagatggcactcatactgatttctatgtt
ttccccaacactgtgtttgaaacaaggaaacctcagactatgaagattcgaataatggct
gtggacaacagtatacctcaagttgtaataaataagggtgctcagactctccgtgttctg
gccacaggtcacatcgggtttctgattaccaacaaagtgctcagagtggaagacagggac
agtttacatgttactcttaagttcagaatcacagagggtccacgccatggcttcctgatt
cacctggggaaaggcaaccatagcatcagccagttcacccaagctgatattgatgatatg
aagatatgctatgttttacgaggaggtgacaatgccaccagtgacatttttcatttctta
gttgaagatggtggaggcaataagctgaagaatcaacattttcgcctaaactgggcatgg
atctccttagaaaaggagtattacttagtaaatgaagactccaagtatctcgacgttgtt
cttaaacgtaggggatacctgggagaaacctcttttataagtattagcaccaaagatggt
actgccaagaaagataaagacttcagaggaaaagcccagaagcaagtgcagtttaatcct
ggtcaaaccttagctacgtggcgagtacggattttgagtgatggtgaacatgaacattct
gagtcctttcaaattgttctttctgagcctgtcatggcaattctggagtttcctgctgca
tccacagtggaaattattgacccaggagatgaatcaacagtctttattcctcagtccacc
tatactattgaagaagatgttggtgagttatttattccagtcagaagaagtggagatgtg
agtcaggagctgatggtcatctgctacacacaacaaggaacagcatctggcactgcccca
acctctgtactttcctactctgactacatctccaggccagaggaccacaacagcattctg
cgttttgacaaagacgaacgcgaaaaaacgtgtcggatcgtcatcatagatgattccctg
tatgaggaggctgagacctttgatgttttactgagcatgcccatggggggaagaattggt
gcagaattcccaagcactcgcattaccattgtacctgacaaggatgatgaaccagctttc
tactttggagatgatgaatactacgtagatgagagtgctggctacgtagaggtccgtgtc
tgcaggaccgggaccgacctgtccaaagccgcctctgttacggtgaggtctcgcaaatct
gagccgctgactgcagaggctggggtagattatgtaggcatcagtcgtaatttggatttt
tcccctggagtcaatatgcagacatttcgtgtgataattctggatgatcttggacagcca
gtgttagaaggagcagagaagtttgagcttgtgctaaggatgcccatgaatgctgctcta
ggagaacccagcaagaccaccatcttcattaatgactcagtgtctgatttgccaaagatg
cagtttaaagaatctgtgtatgtaggcaatgaaaatgatgggcaggtttctgccatgata
tacaggagtggggatatccgatacacatccactgtgagatgctatacaaggcaaggttca
gctcaggttatgatggacttcgaagaacgtcctaatactgacagttccatcatcacattc
cttcctggtgaaactgagaagccttgcacgctggtgcttgcggatgatactttccacgag
gaggaggaagagctgcgcctggttcttggcacccccagaagtgattcttcctttggcgcc
tccgttggcgagcaaaacgagacgctgataaagattcgggatgacgcagacaaggctatc
attaagtttggtgagaccaaatttagtgtgagtgaaccaaaggacgcaaggcaagtagca
actgtgaaaatcccagttcttcgtctaggagacacttccaaagtttctgttgtgagagtt
catacgaaggatggatctgctacttctggagaagactatcatcctatatcagaagaaatt
gagttcaaggagggtgaagcacagcactttgtggagattgaagttctctttgatggagta
agggagatgagagaagctttcactgttcacctgaagcctgatgagaacatggttgcagaa
atacagacagccaaggccattgtttacatcgaagaaatgaacagcatggcagatgtcacc
tttccctctgtccctcaagttgcatctctgttgatatatgatgatacttctaaagccaaa
gacaaaaccagtcccattgctggctatcctgtcatctgtattacagcttgtaaccctaag
tatgaagactttgagaagactggctcgatatgtgccagtgagaacatcaataacactctg
acgcagtaccggtggctggtcagtgcccctgctggccccgacggagtgaccagccccatg
aaggaggttgactttgacaccttcttcacttcctccaagatgattactctcgactccatt
tactttcaagctggttctcgtgtccagtgtgcagctcgggctgtgaattcagatgggaat
gagggtctggagcttatgagccctattgtcactataagcacatcagaaggtctttgtcag
cctcgtatatcaggagtagttggagcagagccattctctgccaaactgcgctacactggc
ccagaagatcctgaatatgccaacctcatcaaactgacagtcactatgccacatattgat
ggcatgctgcctgttatttctacaagagagctctccaactttgagctgacacttagccct
gatggaactagagttggaaaccataagtgctccaacctgttggattacacagaagtgaag
acccaccatggttttttgactgacgccaccaagaatcccgatgtgattggagagaccatt
ccctatcagtacagcccgacaatgagaggcttcaataccttgcgcttctaccgcaacctg
aacctggaagcctgcttgtgggagtttgttagctactatgacatgtctgagctcctcact
gattgtggaggcaccattgggacagatggacaggttctcaacctagtgcagtcctacgtg
acgctgagagtccctttgtacgtctcctacgttttccactctccggtgggcgtcgggggc
tggcagcatttcgacctgcagtcagagctccggctgacttttgtgtatgacactgccatc
ctgtggaaggacgggatcggcagcccacctgaggcagagctccaaggttccctgttcccc
accagcatgcgcatcagtgaagaggggcgcttggttgtcaacttcaagaccgaagcccgg
tttcatggtctgtttgttatgtcccatcctgcttcatctctaacttccatggttatgtca
gctgaccacccagggctcaccttcagcctgagcctcatccgaagtgagcccacctacaac
ctgccagtgcagcagtggagcttcgtgtcagactttgcggttcgagactattctgggatg
tacacggtgaagctgatagcctgcaccactgccccgcatcaggagtacagcctgccagtg
atctgcaatcctagagagcccatcacttttgacctggacatccgattccagcaggtcagt
gacccagtggctgctgagttcagcttgaacacccagatgttcctcctctccaaaaagact
ctgtggctgtctgatggctcgatgggctttgggcaagaaagtgatgttgctttctcagaa
ggtgatgtcatatacggtcgggtgatggtggatccagtgcagaatttgggtgattccttc
tactgtagcatcgagaaggttttcctgtgcacaggagctgatggatatgtacccaaatat
aatccatccaacactgaatatgggtgtcttgctgattctccatcccttctgtacaggttt
aagattgtggacaaagctcagccagagacacaagccacaagctttggaaatatacttttt
aatgcaaaacttgcaatagatgatcctgaagcaattccattagttaaacagccaggctct
gatggatttaaagtagactcaactcctctgtttcaggtgtctttgggtagggagtggtac
gtccacacaatctacactgtgcgttccaaggagaacgcgaaccgcggaatcggcaaaagg
agcgtggagcagcagtaccactcactcctcagtgctgcgagcccaggagcctccccacgg
agaaggcagaggaggggagtgcagcgggccccagaacttgccagagacattggagcagag
aacaaccgaggaacgaacatacagcacatagccctggatcgcaccggcaagaagcaggtg
cctcagagggaggttgcactcaatggtgttctccccagggaactgaataaccaaagtgca
ggaaccagcttagtcacaatcattggtggagctgctgccattttccttgccatctgctta
attgcaattatcgttctgctgctaaaatggaaacaaaattctgacaagaaggaaagcaca
aacgagtcgggcagcaacgaaccgatgatgctgccacataattacagcaatgacagctca
gaggtttga
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integrated database retrieval system
