Ficedula albicollis (collared flycatcher): 101805990
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Entry
101805990 CDS
T02815
Symbol
SOX30
Name
(RefSeq) SRY-box 30
KO
K09271
transcription factor SOX15/30
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101805990 (SOX30)
Transcription factors [BR:
fab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101805990 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101805990
NCBI-ProteinID:
XP_005053592
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Position
13:<4371772..4379106
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AA seq
609 aa
AA seq
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GSPASPPRHREVMGPLGGLRVPVQEHPGRPAHSEGAAKKSRCISAPAAVENEARNAIRRE
RDHERGSGDRPNEEKILEQTGHKPWRRAAVQTERAKLAYEARPVKVEKSDAPAASLCELG
NPPQEQNIPVLFQSLPSRSHVQLQGPVPSQLMHVTPVPVKQMPVQLQPLLQRPKIETKNV
PLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANPGANNAEISVQLGL
EWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGSAAFSGTSQSTMTTN
PAGSLPFSTPTYSFVNSNVKNSIARPVCESPAICLPASSIQHAGPMTLFQTTAASTTSVA
VAVPTLPLRPVVSSQHFAEPAQTEAFVSPGLNFSLKRPAPVFAESFSSRNPSNISSTSGR
FSVSNTEIPGISVFPRGIALPQPTPFIPSPAYVSAPIGQPASLFGGTPQFPFCHPSFIPG
PRCFPSSTFPLRAPFGYGNFSSSVPQCFGFYEERNQRQEVIFSTLDEDYHFRAYSGESLH
ENQHVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPSSTYIVNVTDSDEE
EEVKFFQVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gggagccccgcctcgccccccaggcacagggaggtcatggggcccctcggggggctgcgc
gtcccagtgcaggagcacccgggccggcccgcgcacagcgaaggagcggccaagaagagc
aggtgcatctcggctcctgcggccgttgagaacgaggcccggaatgccatcaggagagaa
agggaccatgaaaggggcagcggcgaccgcccgaacgaggagaagatcctggagcaaact
gggcataagccttggaggagagctgccgtccaaacggagcgagccaagctggcctatgag
gctcgcccggtgaaggtggagaagagcgatgccccggctgcatccctgtgcgagcttggg
aaccctcctcaagagcagaatatcccggtcttgtttcagtccttgccttccaggtcccac
gtgcagctccaaggccctgtgccctcgcagctgatgcatgtgactccagtgccggtaaaa
caaatgccagttcagttgcagcctctactgcagcggccaaagattgaaacaaaaaacgtt
cccctcacagtgctgccctcggattcagggatgccagacactccattcagcaagaccaaa
agtggccgtgtgaagcgccccatgaacgcattcatggtgtgggctcggatccacagggct
gctgtggccaaagccaacccaggggccaacaatgcagagatcagcgtccagctcggcctg
gagtggagcaaactcactgaagagcagaagcagccgtactacgaggaagcaaacaaaata
aaactgaggcacagggaggaatttcctggttgggtttatcaaccgaacaaaaagaagtgt
tctccaccacctggctctgctgcgttttcgggcacttcccagagcaccatgactacaaat
ccagctggcagccttcccttctcaacacctacttactcttttgtcaactccaacgttaag
aacagtattgcacgtccagtctgtgagtctcctgccatctgtctgccagcttcctccatc
cagcatgctgggcccatgacccttttccagaccacggctgcaagcaccacatcagtggct
gttgcagttccaaccctgcccctgcgccctgtagtttcatcccagcactttgctgaacct
gctcagacagaagcttttgtgtcacctgggctcaatttctccctgaagagacctgcaccc
gttttcgctgagagcttcagcagcagaaaccccagtaacatcagcagcactagtggcagg
ttttctgtctctaacactgagatcccagggatttctgtttttcctagaggcatagctctt
ccccagcctaccccttttattccctcacctgcctatgtgtctgctcccattggacaacca
gccagtttgtttggaggaactcctcagtttccattttgccacccttcctttatacctgga
cctcgctgtttcccctcaagcacattcccactcagagctccgtttggctacgggaatttc
tccagctcggtgcctcagtgctttggcttttatgaagagaggaaccagaggcaggaggtg
atattttccactctggatgaagactatcattttagggcatactcaggagagagcctacat
gagaaccagcatgtctgtgggagccctgaggttgtgtcctgtcagagcacctgcagtgag
gagcgagttctgagccccctgccacagctggatgtggaagtggtagaggaggttttgcca
tcccccccatctactccctccagcacttacattgtcaatgtaactgacagtgatgaagaa
gaggaggtaaagttttttcaagtattgtaa
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