Ficedula albicollis (collared flycatcher): 101806045
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Entry
101806045 CDS
T02815
Symbol
PPFIA1
Name
(RefSeq) PTPRF interacting protein alpha 1
KO
K26226
liprin-alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101806045 (PPFIA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101806045 (PPFIA1)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101806045 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
HWE_HK
Motif
Other DBs
NCBI-GeneID:
101806045
NCBI-ProteinID:
XP_016154539
LinkDB
All DBs
Position
5:complement(7174376..7228644)
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AA seq
1233 aa
AA seq
DB search
MMCEVMPTISEAEIPAGGNGGHGSGSPLQSDADSHFEQLMVSMLEERDRLLETLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKKTLPDGMLDVNHEQENTPTTNGKRSSD
DGLLCHDENLAKVIELQDIIDKQNKEQTQMKERLTALSSRVTELEEDLDTARKDLIKSEE
MNTKLQRDVRETLAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIATKDSMHRQ
SEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQM
EAQLEEKNQELQRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKERMAALEDKNSL
LREIENAKKQIEELQHEKDQLVLNVDKLRAENDQVRLRATSLHHSRPDFRFPVPSSSVGD
SHTDSYGTSSVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDV
SDVEDDRETIFSSVDLLSPSGQADAQTLAIMLQEQLDAINKEIRLIQEEKENTEQRAEEI
ESRVGSGSLEAHGRFRSLGSIPPTYAPGSLAGSSPPGSGRSTPRRIPHSPAREVDRLGIM
TLSPASREEVRDDKTTIKCETSPPSSPRSLRLDRVQKGALHTVSHEDIRDIRNSTGSQDG
QTSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQGSKEALGQGGVGEADGSS
QDALGLSKLGGQAEKNRKMQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVA
ACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGN
VWVTHEEMENLTATQQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLV
DARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQSEIKDVL
VWSNERMIHWVVSIGLKEYANNLLESGVHGALVALDESFDYNALALLLQIPTQNTQARAV
LEREFNNLLAMGTDRRLDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTTS
MSSPSMQPKKMQIDGSVSGTQRLDSATVRTYSC
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagtgaggccgagattcccgccgggggaaatgga
ggccacggttcaggttccccgttgcagtcagatgccgattcccactttgagcagttaatg
gtgtccatgctggaagaaagggatcgtctgctggaaacgctccgagaaactcaggagacg
ctcgctctcacccagggcaagctgcatgaggttggccatgagagggattccttgcagagg
cagctcaatactgcacttccacaggaatttgcagcgcttacaaaagagctcaatgtatgc
agggagcagctgcttgaaagggaagaagaaattgctgaactgaaagcagaaagaaataat
acgaggctattgctggaacacttggagtgtcttgtgtccaggcatgagcgatccctcagg
atgactgttgtgaagaggcaagctcagtctccagcaggagtttctagtgaagtagaagtt
ctcaaagcactaaaatctttatttgagcaccacaaagcccttgatgaaaaggtgagggag
aggttacgagtagcacttgaaagatgtagcttgttggaagaagaactaggtactacacat
aaagagttaatgattctgaaagagcaaaataatcagaagaaaacacttccagatgggatg
ctggatgtaaatcacgaacaagaaaatacaccaactacaaatgggaagagatcctctgat
gatggtttgttatgccatgatgaaaaccttgctaaagtaattgaactccaagacattata
gataagcaaaacaaagagcagacacaaatgaaggaacgcctcactgctttgtccagcaga
gtaacagagctggaagaagatctagacacagcaaggaaagacttaataaaatctgaagaa
atgaacacaaagttacagagggatgtacgagagactctggcccagaaggaggacatggag
gagagaatcaccactctggagaaacgctacctcgctgcacaacgtgaagcgacatctgtg
catgacctcaatgataaacttgaaaatgaaattgccactaaagactccatgcaccgacag
agtgaagataagaacaggcaactgcaagagcgactggaactggctgagcaaaagctgcag
cagaccctgagaaaagctgagactttgccagaagtggaggctgagctggcacagagagtg
gcagcactttcaaaggctgaggaaagacatggcaatatcgaggagcgactgagacagatg
gaggcacagcttgaagagaagaatcaagaactgcaaagggctagacagagagagaagatg
aatgaagagcataataaacgtttgtcagaaactgttgataagctcctgtctgaatccaat
gaaaggctccagcttcatctcaaagaaaggatggctgccctggaagataagaattcactt
cttcgagaaattgaaaatgcaaaaaaacaaatagaagaacttcagcatgaaaaggatcaa
cttgtattaaatgttgataaattaagggctgaaaatgaccaagttaggctaagagccaca
tcacttcatcatagcagaccggatttcagattccctgtgccatcctcctctgtgggggac
agtcacactgactcctatggcacctcctctgtgctgaggcggccccagaaggggcgtctg
gctgctctcagagacgagccttcaaaggttcagaccctgaatgagcaggattgggagcgg
gcccagcaagccagcgtgttggcaaatgtggcacaagcatttgagagtgatgtggatgtg
tctgatgtggaggacgacagggagaccattttcagctcagttgatctgctgtcaccaagt
ggtcaggctgatgctcagactttggccataatgctgcaggaacagttggatgcaatcaac
aaagagatcagactgatccaggaggagaaggagaacacggagcagcgcgcggaggagatc
gagagccgcgtgggcagcggcagcctggaggcgcacggccggttccgctcgctgggctcc
atccccccaacctatgcccccgggagcctggccggctcctccccgcctggcagcggccgc
tccacgccccggcgcatcccacacagcccggccagggaggtggacaggctgggcatcatg
accttgtctccagcttccagagaagaggtacgagacgacaaaaccacgataaaatgtgag
acatcaccaccttcttcacctcggtctttgcgtctggacagagtccagaaaggagctctg
cacacagtgagccacgaagatatcagggacattaggaattcaacaggttcacaagatggg
caaacaagtaatcctagtagcagtaacagcagccaagattcccttcacaaagcccccaaa
aagaaggggatcaaatcctccattggccgcctgtttggcaagaaggaaaagggacgacct
ggacaaggaagcaaggaagctctaggacaaggtggcgtgggagaagcagatggttcctct
caggatgcattaggtctcagcaaacttggaggtcaggcagagaaaaacaggaaaatgcag
aaaaagcatgagttgctggaggaagccagaagacaaggtttgccttttgcacagtgggat
gggcccactgtggtggtgtggctggagctgtgggtggggatgccagcctggtacgtggct
gcgtgccgagccaatgtgaaaagcggtgctatcatgtcagccctgtctgacacggaaatc
cagcgggaaattggcatcagtaatcccctgcacaggctcaagctccgcctggccatccag
gaaatcatgtccctaaccagcccctctgcccctccaacctcaaggacgaccacgggaaat
gtctgggtaacacatgaagagatggaaaatcttacagccacacaacaaacggaagatgag
gagggaagctgggctcagacattagcctatggtgacatgaaccatgagtggattggcaat
gagtggctgccaagcctggggctccctcagtaccgcagctacttcatggaatgtctggtg
gatgctcggatgctggatcacttaactaaaaaagacctgcgtgggcagctgaaaatggtg
gacagctttcacagaaacagttttcagtgtggaattatgtgcctccgaagactgaattat
gatcgaaaagaactggaaagaaaaagagaagaaagccagagtgaaattaaggatgtcctt
gtgtggagcaatgagagaatgatccactgggttgtgtccattggccttaaggaatacgcg
aataacctgctcgagagcggagttcacggtgcacttgtggccttagatgaatcctttgat
tacaatgcattagctctgctgctgcaaatccccactcaaaacacacaggctcgtgctgtt
ctggagagggaattcaataacctccttgctatgggcactgacagaagacttgatgaagat
gatgataagagttttaggagagcaccttcgtggagaaagaagtttagaccaaaggacata
agaggtttagctgctggatcagcagagactcttcctgcaaatttcagagttacaacctca
atgtcttcaccctctatgcagccaaagaagatgcagattgatggcagtgtatcaggaaca
caaagattggattctgctacagtaaggacctactcctgttaa
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