KEGG   Ficedula albicollis (collared flycatcher): 101806067
Entry
101806067         CDS       T02815                                 
Symbol
LARP1
Name
(RefSeq) La ribonucleoprotein domain family member 1
  KO
K18757  la-related protein 1
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fab03019]
    101806067 (LARP1)
Messenger RNA biogenesis [BR:fab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101806067 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 101806067
NCBI-ProteinID: XP_016157012
LinkDB
Position
13:complement(5191490..5275081)
AA seq 975 aa
MLSNPPRWRCSGSRDVLGDWIKLVGAGKLLRSLEKIERRDIFPTDGQSELTTPAKVVRAA
NPRQRKGSKVGDFGDATNWPTPGEIAHKSVQQPHKAPSLRKLPVKKDMKEQEKGDGSDGK
ESLKTKSDESGEEKNGDDDNQKSAQKKKGNKHKWVPLQIDMKSEVPRDKTASRNNRQNEQ
HRHPSNNRSELKGWHPDNKHERSWQDHDETSSVKSEGGAVRGTFRGRGRGRGRGRGRGRG
GHFDYQYGYRKFEGSDGSRTQKYASNITYYFDNISSAELYSVDQELLKDYIKRQIEYYFS
VDNLERDFFLRRKMDSDGFLPITLIASFHRVQALTTDISLIIKALKDSKVVEIVDEKIRR
KEQPEKWALPGPPMADYTQTDFSQFINCPEFVPRQSFQKETESAPGSPRAASPVPTKTEE
VSNLKTMPKGLSTSLPDLDSETWIEVKKRPRPSPARPKKAEESKTPQQQKQKDQDEPEEL
DFLFDEEMEQMDGRKNTFTDWSDEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNH
TSRAKMSSELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTP
EPPVDPNQEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRT
PRTPQLKDPTQTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRT
ASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLG
IGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEKK
FRPDIFKDFQEETIKDYEAGQLYGLEKFWAFLKYSKAKNLDINSKLQEYLSKFKRLEDFR
VDPPMGEEGGHKRYPTTSGGDGRKRYPSQSSSKTVSQCPSSQAHASASQPAQEDAKNLSQ
QSPAPSAAESQTVGK
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgttgagcaatccgccgcgctggcggtgcagcggctccagggatgttctgggggactgg
ataaagctggtgggtgctggcaagcttttaaggagtctggaaaaaattgagagaagagat
atatttccaactgatggccagtctgaacttacaactccagcgaaagtggtgagggctgca
aacccgagacagaggaaaggaagcaaggttggcgactttggtgatgccacaaattggcca
acacctggagaaatagcccacaagagcgtccagcagccacacaaagcaccgtcccttcgg
aagctgcctgtcaagaaagacatgaaagagcaggaaaagggggatgggagtgacggcaaa
gagagcctgaaaaccaaatctgatgagtctggggaggagaagaatggtgatgatgacaac
cagaagtcagcccagaagaagaaaggcaacaagcacaaatgggtccctctgcagatagac
atgaagtcagaggtgcctagggacaaaacagcctctcggaacaaccggcagaatgagcag
cacaggcacccctccaacaaccgcagcgagctcaaaggctggcaccccgacaacaagcac
gagcgcagctggcaggaccacgatgagacgtccagcgtgaagagcgagggaggcgccgtg
cgaggaaccttccggggccggggccgcggccggggcaggggccggggccggggcagagga
gggcactttgactaccagtacggataccggaaattcgagggctcggacggctcccgcacc
cagaagtacgccagcaacatcacctactacttcgacaacatcagcagtgctgagctctac
agcgtggaccaggagctgctcaaggactacatcaagaggcagatagaatattacttcagt
gtggacaacctggagcgagacttcttcctgcgccgcaagatggactcggacggcttcctg
cccatcacgctgatcgccagcttccaccgcgtgcaggcgctgaccaccgacatcagcctc
atcatcaaggctctgaaggacagcaaggtggtggaaattgtggatgagaagatcaggaga
aaagagcagccagaaaaatgggctctgcctggccctcctatggcagactacacacagaca
gacttctcacagttcatcaactgccctgagtttgtgccccggcagagcttccagaaagag
actgagtccgctccaggctccccacgtgctgccagcccagtccccaccaaaacagaggag
gtcagtaacctgaagacaatgcccaagggcctgtccacaagtctgccagacctggattca
gagacatggattgaagtgaagaagagaccccgaccttctccagccaggcccaagaaagca
gaggagtcaaagacaccgcagcagcagaagcagaaggaccaagatgaacctgaggagctg
gacttcctgtttgatgaggagatggagcagatggatggccgcaagaacaccttcaccgac
tggtcagacgaggactcggactacgagatcgacgaccgcgacgtcaacaagatcctgatc
gtgacgcagacccccccgtacctgcgccggcaccccggcggcgaccgcactggcaaccac
acctccagggccaaaatgagctcggagctggccaaggtcatcaacgatgggctctactac
tatgagcaggacctgtggacagagcagtttgagccagagtattcgcagatcaagcaagag
gtggagaacttcaagaaagtgaatatgatcagcagggagcagtttgacaccctgacccca
gagccccccgtggatccaaaccaggaggtccctcctggtccccccaggttccagcaagta
cctacagacgctttggccaacaagctcttcggagtccctgagccttccaccatcgcccgc
tctctgcccacgactgtcccagaatcgcccaactaccgcaacgccaggacgccccgcacc
ccgcgcacgccgcagctcaaggacccgacacagacgccccgcttctaccccgtggtgaag
gagggcaggacgatagatgccaagactccgcggaagaggaagacgaggcacagttcgaac
cccccgatggagtgccacgtgggctgggtgatggactccagggagcaccggccccgcact
gcctccatcagctccagcccctcggaggggaccccggccgtcgggagctacggctgcacc
ccgcagtccctgcccaagttccagcatccctcgcacgagctgctcaaggagaacggcttc
acacaacacgtctaccacaagtaccggcggcgctgccttaacgagcgaaaacgactgggc
attggtcagtcccaggagatgaacacgcttttccggttctggtccttcttcctccgagat
cacttcaacaagaaaatgtacgaggagttcaagcaactggctgtggaggatgggaaggag
ggttacaggtacggtctggagtgccttttcagatactacagctatggcctggagaagaaa
ttccggccagacatatttaaggacttccaagaagagaccatcaaggattatgaagctggg
cagctctatgggctggaaaagttctgggccttcttaaaatattccaaagccaaaaacctg
gacattaacagcaaactgcaagaatacctcagcaagttcaagcgcctcgaggacttccga
gtagatccacccatgggggaggaaggtggacacaagagataccccacgacgtcaggggga
gatggcaggaagcgctacccatcccagtcttccagcaaaacggtcagccagtgcccatcc
agccaagcccacgcctcagccagccagcctgcacaagaggatgccaaaaacctgagccag
caatcccctgccccatcagctgcagagtcgcagacagtggggaagtag

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