Ficedula albicollis (collared flycatcher): 101806134
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Entry
101806134 CDS
T02815
Symbol
SS18L1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101806134 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101806134 (SS18L1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101806134 (SS18L1)
GBAF(ncBAF) complex
101806134 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
101806134
NCBI-ProteinID:
XP_005057410
UniProt:
U3K7Q4
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All DBs
Position
20:complement(10642201..10656584)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASSQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMSVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgcactcaataccaacaaatcttgcacagaaatctggtttac
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatataaacttgggcccgggagggatgagtcagagtgcatccagccaatccctccac
tcgcagagcaatctcagcgatgccatcgggaccggccttcctccttcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcaggccagaacaccatg
cccacgacctccctgagtatgagtgtcagcagccatggcactggccccggctacagccac
accgtgcctgcctctcagaacgtgcccatgcaaggccaggggtcaataggcaattatgtc
tctcgaacaaacatcaacatgcagtctaacccagtgtccatgatgcaccagcaagcagca
acgtcacattacaactcggcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcctcacagcaaggttcctcgcagcagtacatgggtcaggaagaatattacagt
gagcagtacagtcatggccaaggctcttcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcaatcatcctataccgaacagagctacgaccggtcg
tttgacgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacagagttacccaggacaacagcaaggatatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttatagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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