Ficedula albicollis (collared flycatcher): 101806451
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Entry
101806451 CDS
T02815
Symbol
LHX1
Name
(RefSeq) LIM homeobox 1
KO
K09372
LIM homeobox protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101806451 (LHX1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
101806451 (LHX1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
SpoIIIAH
Motif
Other DBs
NCBI-GeneID:
101806451
NCBI-ProteinID:
XP_005056668
UniProt:
U3JRU9
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All DBs
Position
19:10307569..10313905
Genome browser
AA seq
406 aa
AA seq
DB search
MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG
TKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLN
NSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGSNYDFFPQGP
PSSQAQTPVDLPFVPSSGPSGTPLGAMDHPLPGHHPSSEAQRFTDIMSHPPGDSPSPEPN
LPGSLHSMSAEVFGPSPPFSSISVNGGANYGNHLSHPPEMNEAAVW
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgtgcaggctgcaaaaggccgatcttggaccggtttttgttgaatgtactg
gacagggcttggcatgtgaagtgtgttcagtgctgtgaatgtaaatgcaatttgacagag
aaatgcttttcgcgagaaggcaagctttactgcaaaaacgacttctttcggtgtttcggg
accaagtgcgcgggctgcgcccagggcatctcccccagcgacctggtccgcagggcgcgg
agcaaagtgttccacttgaactgttttacgtgtatgatgtgtaacaagcaactctccacc
ggcgaggagctctacatcatagacgagaacaagtttgtctgcaaagaagattacctaaat
aacagcaatactgccaaagaaaacagcctgcattcagccaccaccggcagtgaccccagc
ctgtcccccgactctcaagacccctcccaggacgacgccaaggactcggaaagcgccaac
gtgtccgacaaggagacgggcagcaacgaaaacgacgaccagaacctgggggctaaacgg
cggggaccccgcaccaccatcaaagccaaacagctagagactctgaaagccgccttcgcg
gccaccccaaaacccacccggcacatcagggagcagctggcacaggagaccggcctcaac
atgcgggtcatccaggtttggttccagaaccggcgctccaaggagcggcggatgaagcag
ctgagcgcgctgggcgctcggagacacgcgttcttccgcagcccgcgcaggatgcggccg
ctcgtggaccggctggagcccggcgagctcatccccaacgggcccttctccttctacgga
gactatcagagcgagtattacggccctggaagcaattacgatttcttcccgcaaggaccg
ccttcgtcccaagcgcagacccccgtggatctcccgttcgtgccctcctcggggccgtca
gggaccccgctgggggccatggaccaccccctgcccggacatcacccctcgagtgaggct
cagcgcttcaccgacatcatgtcgcaccccccgggggactcgcccagccccgaacccaac
ctgcccgggtccttgcactccatgtccgccgaagtttttggccccagccccccattttcg
tcgatatccgtcaacggtggtgctaactacggcaatcacttgtcccaccctccagagatg
aacgaagcagctgtgtggtag
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