Ficedula albicollis (collared flycatcher): 101806646
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Entry
101806646 CDS
T02815
Symbol
PUM1
Name
(RefSeq) pumilio RNA binding family member 1
KO
K17943
pumilio RNA-binding family
Organism
fab
Ficedula albicollis (collared flycatcher)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
101806646
NCBI-ProteinID:
XP_005058425
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All DBs
Position
23:complement(1168823..1265143)
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AA seq
1188 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPTMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYTNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDAESDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKSNGLPVQNGIDADVKDFSRTPG
NCPSSAGEVDLLGPSQNGSEGLAQLASSNGAKPVEDFPSMESQSVPLDAMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPGALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAATNSASQQGQQQGQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTSNLASSSFYGNSSLSSNSQSSS
LFSQGSAQPNTSLGFGSSSSLGATLGSALGGFGTAVANSSTGSGSRRDSLTGSSDLYKRT
SSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNG
SGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNR
YPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNY
VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELD
GHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCL
PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA
SNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRK
IVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgcgtgttgaagagaaaagcagttctgtggcaggactcgttcagcccc
cacctgaagcagcacgctcaagacacagccaaccccaccatgcctgtggtactgacatct
ggcacaggctcgcaggctcagccacagccagctgcaaaccaggccctggcagcagggaca
cactccagccccgtgcccggatccataggagtggcggggcgctcccaggacgacgccatg
gtggattatttcttccagaggcagcacggggagcagctcgggggaggaggcagcggcggc
ggcggctacaccaacagcaaacaccgctggcccaccggggacaacatccacgcagagcat
caggtgcgttccatggatgagctgaatcacgatttccaagcgctggctctggagggacgg
gctatgggagagcagctgttgccgggtaaaaagttttgggaatctgatgattccagcaaa
gatggaccaaaagggatatttctgggagatcagtggagagacagtgcttggggaacatca
gatcactctgtttcccagccaattatggttcagagaagacctgggcagggcttccatgtg
aacagtgaagtcaactcagtgctgtccccacggtcagagagtggggggctgggggtgagc
atggtggagtatgtgctgagctcatctcctggagactcctgcctaaggaaaggaggattt
gggccaagggatgcagagagcgatgagaatgacaaaggggataagaagaacaagggcacg
tttgatggagataaattgggagatctgaaggaggagggggatgtgatggacaaatccaat
ggtttgcctgttcagaacgggatcgacgccgacgtcaaagacttcagccgcacgcccggg
aactgcccgagctcggcgggcgaggtggatctgctgggccccagccagaacggctccgag
ggcctggcccagctggccagcagcaacggggccaagcccgtggaggacttccccagcatg
gagtcgcagagcgtgcccctggacgccatggagcacgtgggcatggagcccctgcagttc
gactactcgggcacgcaggtgcccgtcgactcggccgccgccaccgtggggctcttcgac
tacaactcccagcagcagctgttccagaggcccggcgcgctggcggtgcagcagctgaca
gcagcccagcagcagcagtacgccctggctgctgcccaccagccacacatcgcaggttta
gcccccgctgccttcgttcccaacccctacatcatcagcgcagcgcctccgggcacggat
ccctacgcggcggggctggcggcggcggccacgctgggtccagctgtggtccctcaccag
tactatggagtcactccctggggagtttatcctgccagcctcttccagcagcaggcggcc
gccgccgccgccgccaccaactctgccagccagcagggccagcagcagggccagcagggc
cagcagcaggtgctccgtggaggagccagccagcgtcccctgactcccaaccagaaccag
cagggccagcagaccgatcctctggtggccgccgccgccgtcaactcagcgctcgccttc
ggccaggggctggcagcagggatgccaggttacccagtgctggctcctgctgcttattac
gaccagaccggagccctggtggtcaatgctggggccaggaacggcctgggggctcctgtg
cgcctggtggcccctgcccctgtcatcatcagctcctctgcagcccaggcagcggtggcg
gcggcggcggcatcggccaacggagcggcgggggggctggcggggaccaccaacggcccc
ttccggcccctgggcacgcagcagccccagccccagccccagcagcagcccaccagcaac
ctggcctccagctccttctacggcaacagctccctgagcagcaactcgcagagcagctcg
ctcttctcgcagggctccgcccagcccaacacctcgctgggcttcggcagcagcagctcc
ctgggggccacgctgggctcggcgctgggcggcttcggcaccgcggtggccaactccagc
acgggcagtggctcccggcgggactcgctgacgggcagcagcgacctgtacaagagaacc
tccagcagcctgacccccatcggccacagcttctacaacggcctgggcttctcctcctcc
cccgggcccgtgggcatgcccctgcccagccagggccccggccactcgcagactcctcct
ccgtcattgtcctcgcacggctcctcctccagcctcaacctgggggggctgaccaacggc
agtggccgctacatctcggcggcgccgggggcggaggccaagtaccgcagcgccagcagc
gcctccagcctgttcagccccagcagcacgctgttcccgtcgtcgcgcctgcgctacggc
atgtcggacgtcatgccctcgggccgcagccgcctgctcgaggacttccgcaacaaccgc
taccccaacctgcagctgcgcgagatcgccggccacatcatggagttctcgcaggaccag
cacggctccaggtttattcagctgaaactggagcgtgccaccccggcagagcgtcagctg
gtgttcaacgagatcctgcaggcagcctatcagctcatggtggatgtgtttgggaattac
gtcatccagaagttctttgagtttggcagcctggagcagaagctggccctggcggagcgc
atccgtgggcacgtgctgtcgctggcgctgcagatgtacggctgcagggtgatccagaag
gccctggagttcatccccccagaccagcaggtaattaacgagatggttcgggagctggac
gggcacgtgctcaagtgcgtcaaggaccagaacgggaaccacgtggtgcagaagtgcatc
gagtgtgtgcagcctcagtccctgcagttcatcatcgatgccttcaagggacaggtgttt
gctctgtccacgcacccgtacggctgccgggtgatccagaggatcctggagcactgcctg
cccgagcagaccctgcccatcctggaggagctccaccagcacacagagcagctggtgcag
gaccagtatgggaattatgtcatccagcacgtcctggagcacggccggcccgaggacaag
agcaagatcgtggcagagatcagaggcaacgtgcttgtcttgagtcaacacaaatttgcc
agtaacgtggtggagaagtgtgtgacgcacgcgtcgcgcacggagcgcgccatgctgatc
gacgaggtgtgcaccatgaacgacggcccccacagtgccttatacaccatgatgaaggac
cagtacgccaactacgtggtgcagaaaatgatcgacgtggcagagccggcccagaggaag
atcgtcatgcacaagatccggccccacatcgccacgctgcgcaagtacacctacggcaag
cacatcctggccaagctggagaagtactacatgaagaatggggtggatttggggcccatc
tgtggcccccccaacggcatcatctga
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