Ficedula albicollis (collared flycatcher): 101806878
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Entry
101806878 CDS
T02815
Symbol
GABRE
Name
(RefSeq) gamma-aminobutyric acid type A receptor epsilon subunit
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04080
Neuroactive ligand-receptor interaction
fab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101806878 (GABRE)
04082 Neuroactive ligand signaling
101806878 (GABRE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101806878 (GABRE)
Ion channels [BR:
fab04040
]
Ligand-gated channels
GABA-A
101806878 (GABRE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101806878
NCBI-ProteinID:
XP_005046199
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Position
4A:complement(17212738..17250161)
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AA seq
599 aa
AA seq
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MRGGRQPAARSPALGGDASRREERRRCRDFQSEFSSAVFKEEPSDKSAATRQFNAFFTPP
PSAALPGRCGEMRVRRARSRLGAARLQLGSVSTVAAPAVRPSLPPEQATRWHGTRRGGCA
GSGSIPSRIWLCHSGDGLVNELPRAVAGSARELPHPCPLSLLSRCESTEEYDYDYPNISK
TWVLTPNTQETDATQILNSLLKNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTI
DIFFAQTWYDRRLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIW
NDGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQR
TWRLYQFDFTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVS
FWIKRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEY
ATLNYLVGNKKPLEHSHRKARLPPAGAQVMPTYTAININHIMHWPPEMEEDEDEDPGSPC
LEGKECERFFCCIEDCQTGMWREGRVRIHISRLDSYSRVFFPTAFLLFNIVYWIAYLYL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcaggcagccagctgcgcgcagcccagccctcggcggggacgcgtcccgg
cgcgaagagaggcggcgatgccgagacttccagagcgagttttcctctgccgttttcaaa
gaggagccgtctgataaatcggccgcaacgcgtcagtttaatgcttttttcaccccccct
ccgagtgctgcgctccccgggcgctgcggggagatgcgtgtccgccgtgcccggtcgcgc
ctcggagctgcgaggctccagctgggaagtgtcagcacggtggcagctcccgctgtgaga
ccctcgctgccgccggagcaggcgacacgctggcacggcacacgtcgagggggctgcgcc
ggcagtgggagcatcccctcccgcatatggctgtgtcattccggggacggccttgtgaat
gagctgcccagagcggtggcagggagtgccagagagctgccacatccctgccctttgtct
ctcctctccaggtgtgagagcacagaggaatacgattacgattaccccaacatcagtaaa
acctgggtcctcacccccaacacacaggagactgatgccacacagatcctcaactcgctg
ctcaagaactacgacaacaagctgaggcctgacattggcatcaagcccacgttcattgat
gtggatatctacgtgaacagcatcgggcccgtgtctgtcatccagatggagtacaccatt
gacatcttcttcgcccagacgtggtacgaccggcgcctgcggttcaacagcaccctgaag
gcgctgacgctgaacaccaacatggtgagccgcatctggatccccgacaccttcttcagg
aactccaaacgggctgattcccactggataaccactcccaaccagctgctccgcatctgg
aacgatgggaaagtgctctacacgctcaggctgacaatcgaggctgaatgtctgctccag
ctgcagaatttcccaatggacactcactcctgccctttggttttttccagttatggatac
ccccgggaggagattgtctatcgctggaggcgctactccatcgaggtgtctgaccagcgc
acctggaggctctaccagttcgacttcacagggctgaggaacacctcagaagtcctcagg
actggggcaggggagtacatggtgatgacagtttcttttgacctgagcaggcgtatgggt
tactttgccatccagacctacattccctgcatcctgactgttgttctttcctgggtttcc
ttctggatcaagagagactcgacgccagccaggacatctctgggcatcacgactgtgctc
accatgaccaccctgagcaccatctcccgcaagcacctgccccgagtgtcctacatcaca
gccatggacctctttgtctccgtgtgcttcatctttgtctttgctgccctcatggagtac
gccacgctcaactacctggtgggaaacaagaaaccactggagcacagccacaggaaagcc
aggctgccgcctgccggagcgcaggtgatgccaacctacaccgccatcaacatcaaccac
atcatgcactggcccccggagatggaggaggatgaggatgaggaccctggctccccgtgc
ctggaggggaaggagtgtgagaggttcttttgctgcatcgaggactgccagacggggatg
tggcgcgaggggcgggtgcgcatccacatatcccgcctggactcctactcccgcgtcttc
ttccccaccgccttcctgctcttcaacatcgtctactggattgcctatctctatctctag
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