Ficedula albicollis (collared flycatcher): 101806908
Help
Entry
101806908 CDS
T02815
Symbol
DDX5
Name
(RefSeq) DEAD-box helicase 5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101806908 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101806908 (DDX5)
03009 Ribosome biogenesis [BR:
fab03009
]
101806908 (DDX5)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101806908 (DDX5)
Spliceosome [BR:
fab03041
]
Complex A
U1 snRNP components
U1 related factors
101806908 (DDX5)
Complex B
101806908 (DDX5)
Ribosome biogenesis [BR:
fab03009
]
Eukaryotic type
Pre-60S particles
Helicases
101806908 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
101806908
NCBI-ProteinID:
XP_016158212
UniProt:
U3JI17
LinkDB
All DBs
Position
18:complement(9141366..9149105)
Genome browser
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agaggtggacctctctctgggaagaaatttggaaaccctggggagaagcttacaaaaaag
aaatggaatttggatgagctgcccaaatttgagaagaacttctaccaagaacatccggat
gtagttagacgtactgcgcaagaagttgaacagtacagagcgagcaaagaggtcacagtt
aggggccataactgtccaaagccaattatcaacttttatgaagcaaactttcctgcaaat
gttatggaagtaattcagaggcagaatttcactgaaccaactgctattcaagcacaaggt
tggcctgttgcattgagtggactggatatggttggagtggcacagactggatcagggaaa
acactctcttacttgctgcctgccattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatttgtcttgtgttggcaccaacccgtgaactggcccaacaagtgcag
caggtagctgctgaatacagcagagcgtgtcgtctgaagtccacatgtatttatggaggt
gctccaaagggaccacaaatccgtgacctggaaagaggtgtggaaatctgcattgcaacc
cctggaagacttatagacttcctggaagctggaaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
atagtggatcagattagacctgacaggcagactctgatgtggagtgccacatggcctaag
gaagtgaggcagctggctgaagatttcttgaaagaatacgtgcacatcaacatcggtgca
ctggaactgagtgcaaaccacaacattcttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgtttgatggaagaaatcatgagtgagaaggaaaacaaaaca
attgtttttgtggaaaccaaaaggcgttgtgatgatcttaccagaaaaatgaggagagat
gggtggccggcgatgggtattcacggtgataaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagcttgttgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgcgctaggcaagagagactttggagcaaaaacc
caaaacggggcttacagtgcccagagtttcagcaatggaactccctttgggaatggcttt
gcagctgcaggcatgcaggccggcttcagggccggcggtaaccctgcaggagcgtaccag
aacggctacgagcagcagtacggcagtaacattgccaacatgcacaatggcatgaaccag
cagcagtatgcctaccctgccactggtgctgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
