KEGG   Ficedula albicollis (collared flycatcher): 101807184
Entry
101807184         CDS       T02815                                 
Symbol
SNRNP48
Name
(RefSeq) small nuclear ribonucleoprotein U11/U12 subunit 48
  KO
K13156  U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fab03041]
    101807184 (SNRNP48)
Spliceosome [BR:fab03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    101807184 (SNRNP48)
SSDB
Motif
Pfam: zf-U11-48K
Other DBs
NCBI-GeneID: 101807184
NCBI-ProteinID: XP_005041739
LinkDB
Position
2:82568135..82583674
AA seq 579 aa
MVAPQRQPEDLQKEPFQLEAPAYPASNHGWGTMNPIKLPSGKGSQNGGQVLGSTPGVSQC
SSPAVTTALCSTRGQTHPVRHRTCRSLQHPRGVPGQLPRSDNSPVLHEGTNPSRSRLDGA
GEGLMLSCPATTKRSALGAPGRHVPRPGEHPSVRQASIQLCVRGGKFRCSPRPVREDGAG
VSPRPPAGRRRPRPSGTAPFPALLPVPVPVSRGGPAQGCRTEHRNFTLFTHFHNQGHRHS
LVENYLRLSPADFAPAGSRPDSPLGPHSLKILAEHPALHAAAGWVPPPWVLCPYDVHHRV
PRASLERHAASCRLRRMGYSAEEEAEMYDSSFFYENLKVPTVAMDKDLQFHIVKQARAQS
AKEGTGYSEGSYSLLPIEVPQNHKRFTCDLTQADRLALYDYVVEETKKQRSRSQITENDS
DLFVDLAAKITQDDSQKGPKSHLEILAEMRDYKRRRQSYRAKNVHITKKSYTEVIRDVIG
VHMEELSNQWQEENRLDNAEVSEGGKSKSSGRREDRRSASVDSRQSGGSSKDTECTRHRR
DTSRSPSKRRRSRERGRDRDSRRKRERDEDKYHNHKRRK
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggttgccccccagaggcaacctgaagatcttcagaaggagccctttcagctggaggct
cctgcttatcctgcttctaatcatggctggggaaccatgaacccaataaaactcccctca
gggaaaggctctcagaatggaggccaagtactgggcagcacccccggggtgtcccagtgc
agctcccccgcagtgacaacagccctgtgctccacgaggggacaaacccatcccgttcgg
caccgcacatgccgctccttgcagcacccccggggtgtccctgggcagctcccccgcagt
gacaacagccctgtgctccacgaggggacaaacccatcccgttcgcgcctcgatggcgcc
ggggaggggctgatgctctcctgccccgccacgaccaagaggagcgctttgggagctcca
ggcaggcacgtcccgcgtccaggagagcacccctcggtaaggcaggcgagcatccagctg
tgtgtgcggggaggcaaattccgctgttccccgcggcccgtgcgggaggatggggcgggg
gtgtccccgcggcctcccgccggcaggcggcgcccgcgcccctccggcaccgcgccattc
ccggcgctgcttcccgttcccgttcccgtcagccgggggggacccgcacaaggctgccgt
accgagcaccggaacttcacgctatttacacatttccacaatcaagggcatcggcattca
ctggttgaaaattacttacggctcagccccgctgacttcgctcctgctggctctcgcccg
gacagcccattggggccgcactcccttaaaatcctggccgagcacccggcgctacacgca
gctgcaggatgggtgccgcccccttgggtgctgtgcccctacgacgtccatcaccgcgtc
ccccgcgcgtcgctggagaggcacgcggcgtcctgccggctccgcaggatggggtactcc
gccgaggaggaggccgagatgtacgactccagctttttctacgaaaacctgaaggttccc
accgtcgccatggataaagatctacagtttcacattgttaagcaggctagagcccaaagt
gcaaaggaaggtacaggctacagcgaaggatcttactcattactgcccatagaagttcct
caaaaccacaagcgtttcacctgtgacctgacccaagctgaccgccttgctctttacgac
tacgttgttgaggaaacaaagaaacagaggtctagatcccagataacagaaaatgacagt
gatctcttcgtggatttagcagcaaaaatcacccaagatgatagtcagaaaggtccaaag
tcccatcttgaaattctggctgaaatgcgagattacaaaaggcggcggcagtcatacaga
gctaagaacgttcatataacgaagaaatcctacactgaggtgattcgggatgtgattggt
gtacatatggaagaactcagcaatcagtggcaggaggagaacaggctggataatgcagag
gtatctgaaggagggaagtcaaagtcttcaggaagaagggaagacaggcgctcagcttca
gtggactcacggcagtctgggggaagcagtaaggatacagaatgcacgagacacaggaga
gacaccagcaggagtccaagcaaacgaagaaggagtcgtgagagaggcagagacagagac
tctcggagaaagagagagagggatgaagacaagtatcacaaccataaaagaagaaagtag

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