Ficedula albicollis (collared flycatcher): 101807197
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Entry
101807197 CDS
T02815
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04620
Toll-like receptor signaling pathway
fab04621
NOD-like receptor signaling pathway
fab04622
RIG-I-like receptor signaling pathway
fab04623
Cytosolic DNA-sensing pathway
fab05164
Influenza A
fab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101807197 (IRF7)
04621 NOD-like receptor signaling pathway
101807197 (IRF7)
04622 RIG-I-like receptor signaling pathway
101807197 (IRF7)
04623 Cytosolic DNA-sensing pathway
101807197 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101807197 (IRF7)
05168 Herpes simplex virus 1 infection
101807197 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101807197 (IRF7)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101807197 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
101807197
NCBI-ProteinID:
XP_005046924
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All DBs
Position
5:18052623..18057609
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AA seq
728 aa
AA seq
DB search
MPLREPGLVSLLRAEPGGRCGRPGAASAGDRRWFPSASAPSAARRTLSFIGLSFLAARLT
RQAKAAGSRRIKTNICTQRGGFQPREAPAAPCAAGAPPSASGAVYLFGVCAGPEHPAGAP
VAAAPPRGSGAVSLSEGTRDFQENGTADKESGRRRPPPRRGHRPARHGPDRPGSARLCAP
GTMAAPEKEGEAQKLRFGPWLLSAIDSGSYRGLRWIDSARTIFRVPWKHNARKDITSSDL
EVFKAWAKVSGRYEEGSEDPAKWKTNFRCALSSTHMFRLEYDHSKRGDDPHKVFSIVSAT
LQDSKEGDSSILNPVVAQQEEDSSIPNPVVAQQVAQEQLQLELHPQDMASAITVPESTDP
TQLSILEELLQQCGISPRDFGSQAASWVPAGGYPAGDTPHQDALLQPHQDALLQPHQDTL
LQPHQEILLQPHQDTLLQPYTDTSQNSCSPATTFPQWVEQPTYQPAGLMPPEQTGAVPRP
CPPAEGTVPVQYAAEATLFAPAASSVPQPRLLRADSDGILDVTIYYRGKEFHREVVGGSH
CLLTYQPPGLAEAPCPWQVVRFPSPAGVADGKQRRITEELLGVAGLQLEIRASKVFATRR
KKCKVFWALSQQLEGGEEPPPNLLCRDQETPIFDFNEFCTELWDFHIGQRRRSPDFTIYL
CFGQAFSKAKPKESKLILVKLVPKVCELYYEQFLQAGASSLDSHTISLQLSNSLDLMELI
EQYNMQLG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagggagcctgggttggtgtcgctgctccgggcagagccgggcggtcgctgc
ggccgccccggagccgcctctgccggggaccggcgctggttcccctccgcctcggcgccg
agcgctgcccgccgcactttgtcatttattggtttgtcatttctggcagcacggcttacc
cggcaagccaaggcagccgggagcagaaggattaaaacaaacatctgtacacaacgcggg
ggtttccagccccgggaagccccggccgccccctgcgctgcgggagccccaccctccgct
tcaggtgcggtgtatttatttggggtttgcgcggggccggagcatcccgcgggcgctccg
gtagcggcggcaccgccccgagggagcggggcagtttcactttcggaagggacacgtgat
ttccaggaaaacgggacggcggataaagaatcgggcaggaggcggccgcccccgcgccga
ggtcaccgcccggctcggcacggaccggaccggcccggttcggctcggctctgcgcaccc
ggcaccatggcagcgccggagaaggagggggaagcccagaagctgcggttcgggccgtgg
ctgctgagcgccatcgacagcgggagctaccgcgggctgcgctggatcgactctgcccgc
accatcttccgcgtcccctggaagcacaacgccaggaaggacatcaccagcagtgacctg
gaggtcttcaaggcttgggcgaaggtcagtgggcgctatgaggaaggctccgaggacccg
gccaagtggaagaccaacttccgctgtgccctgagcagcacccacatgttcaggctggaa
tacgaccattccaagcgtggtgatgacccccacaaggtcttctccattgtctcagctacc
ctccaggacagtaaggagggagattccagcatcctgaaccctgtggtggcccagcaggag
gaagattccagcatcccgaaccctgtggtggctcagcaggtggcacaagagcagctgcag
ctggagctccacccccaagacatggcatcagcaatcactgtcccagaaagcacggacccc
acacagctctcaatcctggaggagctgctgcagcagtgtggcatctctccccgcgacttt
ggctcgcaggctgcatcctgggtgcccgcaggtggttaccctgcaggggacactcctcac
caggatgccctgctccagcctcaccaggacgccctgctccagcctcaccaggacaccctg
ctccagcctcaccaggagatcctgctccagcctcaccaggacaccctgctccagccttac
acagacaccagccaaaacagctgctcccctgccacgacatttccacaatgggtggagcag
cccacctaccaaccagcgggcctcatgccaccagagcagacaggggccgtgccacggccg
tgccccccggcggagggcacggtgcccgtgcagtacgcggccgaggccacgctgttcgcg
cctgccgccagctccgtgccgcagccgcggctgctgcgggctgactcagatggcatcctg
gacgtcaccatctactaccgggggaaggagttccaccgggaggtggtggggggcagccac
tgcctgctgacctaccagccccccggcctggcggaggcgccgtgcccctggcaggtggtg
cgcttccccagccccgccggcgtggccgacggcaagcagcgccgcatcaccgaggagctg
ctgggcgtggcggggctgcagctggagatccgcgcctccaaggtctttgccacccgccgg
aagaagtgcaaggtgttctgggccttgtcccagcagctggaagggggcgaggagcccccg
cccaacctgctctgccgggaccaggaaacgcccatctttgacttcaacgagttttgcacg
gagctgtgggacttccacatcggccagaggcggcgatcccctgatttcaccatctacctc
tgctttgggcaggccttctccaaggccaagcctaaggaatccaagctcatcctggtcaag
ctggtgcccaaggtctgcgagttatactacgagcagtttctgcaggcaggagcctcctcc
ctggacagccacaccatcagcctgcagctctccaactccctagacctcatggagctcatt
gagcagtacaacatgcagctgggctga
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integrated database retrieval system
