Ficedula albicollis (collared flycatcher): 101807265
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Entry
101807265 CDS
T02815
Symbol
DHX36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101807265 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101807265 (DHX36)
03012 Translation factors [BR:
fab03012
]
101807265 (DHX36)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101807265 (DHX36)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101807265 (DHX36)
Translation factors [BR:
fab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101807265 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
101807265
NCBI-ProteinID:
XP_005051548
UniProt:
A0A803V566
LinkDB
All DBs
Position
9:25949413..25968363
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AA seq
929 aa
AA seq
DB search
MGRCEDWNPGSEGWRAVVRMDERREEQIVQLLNAVQTKNDKEQEAMSWWSGDEEGSAPEQ
PPKAKPDAEKAPVRQRPTCEKTSLDLDVEYLCEKTEQDADLDEQLKEDLMKKRSDPRYIE
MQRFREKLPSYKMREELVKLINTHRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRI
VCTQPRRISAISVAERVAAERAEACGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWL
QSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFD
HCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRLHWRKGFMQGRVSRPEKEEKEEIY
REQWPAYLRQLQGRYSAGTIDALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWD
NISTLHEILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSIT
IDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR
ASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVTLAINHLMELNA
LDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEK
IADARRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKG
QFAEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKV
CTKTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISI
QKDKDQDTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIERPRPVDWAAVRSRDTAL
LSAIIDLITTQENAAARNFAPRFQGERCS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggtgcgaggactggaacccgggctctgagggatggagagctgtggtgcgcatg
gacgagcgcagggaagagcaaatcgtgcagctgctgaacgctgtgcagactaaaaacgac
aaagagcaagaagccatgtcctggtggtccggggatgaagaaggctctgctccagaacag
cctcccaaagcgaaaccagatgctgaaaaagctcctgtaagacagagaccaacctgtgaa
aaaacatccctggatttggatgtggaatatctctgtgaaaaaaccgagcaggatgctgat
ttagatgaacaacttaaagaagacttaatgaagaagagatctgatcccagatatattgaa
atgcagagattccgagagaagctgccctcgtacaagatgagagaggagctggtgaagctg
atcaacacgcaccgggtgacggtgatcagcggcgagacgggctgcggcaagaccacgcag
gtgacacagttcatcctggacgatcacatcgagcgcgggctgggctccacctgcaggatc
gtgtgcacgcagccccgccgcatcagcgccatctcggtggctgagagagtggctgctgag
agggcagaggcctgtggcaatggcaggagcacgggctaccagatccgcctgcagagtcgg
ttgccaaggaaacaaggttcaattctgtactgtaccacgggaattgtcctgcagtggctc
cagtcagataagcacttgtccagcatcagtcatgtagttcttgatgaaatccacgaaaga
aatcttcaatcagatgttttaatgagcattattaaagaccttctgaatgttcgactggat
ctgaaagtcatactgatgagtgctactttaaatgcagagaagttttctgagtactttgac
cattgcccaatgattcacatccctggattcactttcccagtggtggaatatctgctcgaa
gatgtcattgagaagttgaggtacaccccggagaagacggaccgtcggctgcactggagg
aagggcttcatgcagggccgtgtcagcaggccagagaaggaggagaaggaggagatctac
agagagcagtggccagcctacctaaggcagctgcagggcaggtactcagcaggtaccatt
gatgccctggaaatgatggatgatgacaaggtggacctggaccttgtggcagcactgatc
agacacatcgtgctggaagaggaggatggtgcaattctggtgtttctgccaggctgggat
aacatcagcactttgcatgagatcttgatgtctcaagtcatgtttaagtcagataggttt
attatcatacctttgcattcactgatgcctactgttaaccagactcaggtgttcaagaag
accccaccaggagtgaggaaaatcgtgattgcaaccaacattgcagagaccagcatcaca
atcgatgacgtggtgttcgtgatagatggggggaaaataaaggagactcactttgacacc
cagaacaacatcagcaccatggcagcagagtgggtcagcaaagccaatgccaagcagagg
aagggtcgagcaggaagagttcagccaggccactgttaccacctgtacaatgggctgcgt
gccagcctgctggatgattatcagttaccagagatcctgaggacacccttggaagagctc
tgcttacaaatcaagatcctgaagcttggtggaattgcctatttcctgagcaagctgatg
gaccccccatctcgtgatgctgtgacattggccataaatcacctcatggagctgaatgct
ctggacaggcaggaggagctgactcccctgggcgtgcacctggcacggctgcctgtggag
ccacacatcgggaagatgatcctgtttggagccttgttctgctgcctggaccctgtgctg
accattgcagccagcctcagcttcaaggacccttttgtcatccctctgggcaaagagaaa
atcgcagatgcaagaagaaaggagctgtcaaagaactcaaaaagtgaccatctgactgtg
gtgaatgctttcactggctgggaagaggctcggagctgtggtttcaggaatgagaaggac
tattgctgggaatatttcctgtcctcaaataccatgcagatgctgcataacatgaaaggg
cagtttgctgagcatctccttgcagctggatttgtgaacagcagaaaccctaaggatccc
aaatctaacaccaactcaggtaatgagaagctgctcaaagcagtcatctgtgctggcctc
tatcccaaagtggcaaagatccggcccagcttcagcaaaaagaggaaaatggtgaaggtt
tgcaccaagacagatggatcagttaatatccatcccaaatcagtgaatgtggaggaaaca
gagttccattataactggctcgtgtaccatttgaagatgaggaccagcagtatttacctg
tatgattgtacagaggtgtctccatactgcctcttgttctttggaggggatatatccatt
cagaaggacaaggaccaggacaccatcgctgtggatgagtggattgttttccagtctcca
gaaaaaatagcaaacttggtcaagaaactgaggcaggagcttgacgaccttctccaggag
aagatcgagcggccgcgccccgtggactgggcggcggtgcggagccgggacacggcgctg
ctgagcgccatcatcgacctcatcaccacgcaggagaacgcggccgcgcgcaacttcgcg
ccgcgcttccagggggagcgctgcagctga
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